Pairwise Alignments

Query, 479 a.a., channel protein TolC from Pseudomonas simiae WCS417

Subject, 477 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

 Score =  784 bits (2025), Expect = 0.0
 Identities = 390/477 (81%), Positives = 440/477 (92%)

Query: 1   MLRKLSLALAVSCATNGMVWAAEAPLSANTDLVSVYQEAVDNNADLAAARAQYGAQKEVV 60
           MLRKLSLA+AVSCA+NG+VWAA+ P +  TDLVSVYQEAVDNNADLAAARA YGA++EVV
Sbjct: 1   MLRKLSLAIAVSCASNGVVWAADVPSTVKTDLVSVYQEAVDNNADLAAARADYGARREVV 60

Query: 61  PQARAGLLPNLTGGADINNVRTQIDTPAATANRDAHSWRATLSQPLFRADRWFQLQAAEA 120
           PQARAGLLPNL+ GA++ N RT++D P+ T+NR  +SW ATL+QP+FRADRWFQLQAAEA
Sbjct: 61  PQARAGLLPNLSAGAEMMNTRTKLDEPSITSNRSGNSWSATLAQPIFRADRWFQLQAAEA 120

Query: 121 TNEQAALQLSATEQNLILQSAENYFAVLRAQDNLASTKAEENAFKRQLDQSNERFDVGLS 180
            NEQAAL+LSATEQNLILQ+A+NYFAVLRAQDNLA+TKAEE AFKRQLDQSNERFDVGLS
Sbjct: 121 VNEQAALELSATEQNLILQTAQNYFAVLRAQDNLAATKAEEAAFKRQLDQSNERFDVGLS 180

Query: 181 DKTDVLQSQASYDTARANRILAQRQVEDAFEALITLTNRQYNSIQGIVHTLPVLPPLPND 240
           DKTDVLQSQASYDTARANRI+A+RQV+DAFEAL+TLTNR+Y SIQG+VH+LPV  P PND
Sbjct: 181 DKTDVLQSQASYDTARANRIIAERQVQDAFEALVTLTNREYTSIQGVVHSLPVQVPTPND 240

Query: 241 AKAWVETAGRQNLNLLASNYAVTAAEETLKQRKAGHAPTLDAVAQYEKGDNDALGFSNPN 300
           AKAWVETAGRQNLNLLA+NYAV+AAEETL+QRKAGHAPTLDAVA+Y+KGDND+LGF+NP+
Sbjct: 241 AKAWVETAGRQNLNLLATNYAVSAAEETLRQRKAGHAPTLDAVAKYQKGDNDSLGFTNPS 300

Query: 301 AFGTPYRGDVEQRTIGLRLSIPIYSGGLTSSQVRESYSRLGQTEQQREGLRRQVVENTRN 360
             G  Y GDVEQ ++GL+L+IPIYSGGLTSSQVRE+Y RL Q+EQQRE LRRQVVENTRN
Sbjct: 301 QLGVRYSGDVEQTSVGLQLNIPIYSGGLTSSQVREAYQRLSQSEQQRESLRRQVVENTRN 360

Query: 361 LHRAVNTDVEQVQARRQSIISNQSAVEATEIGYQVGTRNIVDVLDSQRQLYASVRNYNNS 420
           LHRAVNTDVEQVQAR+QSIISNQSA+EATEIGYQVGTRNIVDVLD+QRQLY SVR+YNNS
Sbjct: 361 LHRAVNTDVEQVQARKQSIISNQSALEATEIGYQVGTRNIVDVLDAQRQLYTSVRDYNNS 420

Query: 421 RYDYILDNLRLKQAAGTLNPGDLQDLARYLKADYNPDRDFLPPDLAKAAAEQLKARP 477
           RYDYILDNL LKQAAGTL+P DLQDL RYLK DYNPD+DFLPPDLA AAA+  + RP
Sbjct: 421 RYDYILDNLSLKQAAGTLSPQDLQDLKRYLKPDYNPDKDFLPPDLAAAAAKNFERRP 477