Pairwise Alignments

Query, 833 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 909 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  340 bits (871), Expect = 3e-97
 Identities = 315/905 (34%), Positives = 437/905 (48%), Gaps = 104/905 (11%)

Query: 13  FMPRLSAHHLLRPRLAEPLLAA-QVRVKLLCAPAGSGKSALFAECALQAPKDCPVHWLPL 71
           + P L   ++LRPRL E L A  + R+ L+ APAG GKS+L    A++  +  P HW  L
Sbjct: 23  YRPPLPDGYVLRPRLCERLSAGLEGRLLLVSAPAGFGKSSL----AVEFCQSLPAHWQSL 78

Query: 72  NGIALSPLD-----LCQRL------------AQNLDL--------PFIDEATL---LSDL 103
             + LSP D       +RL            AQ+L L        PF  E  L   L +L
Sbjct: 79  -WLGLSPRDNDPGRFLERLLDGLQQFFPQLGAQSLGLLKMRQRHQPFAFEEWLDGLLDEL 137

Query: 104 A---RWQAPAWVFLDDFCRLPAPDTDALLDRLFTASSPALTWWLGTRRRPLCNWPRLLLD 160
           A     +AP  + LDD+     P  D  L          L   + +R+RP  +  RL L 
Sbjct: 138 AVHLSTRAPLLLVLDDYHLAQGPVLDRCLQFFLNHLPDGLVVLVTSRQRPDWHLARLRLS 197

Query: 161 DELLECGA-DLAFSPVEIQQLLTH----APGQSVDQVLQFSAGWCAGARIALL------G 209
             LLE    DL  +  E   +L        G+++D +++ S GW AG R  LL      G
Sbjct: 198 RHLLELHEQDLRLTHDESLAVLDRHSNSLQGEALDNLIRRSEGWVAGLRFWLLAASEAGG 257

Query: 210 DGHPEKTL-------LDYLQHELFSTLPPELAEAWRVLAHLPRFNAGLCEHLFGFGDGDQ 262
           DG   ++L        DYL  E+   LP ++       A   RF + LC+ +    D  +
Sbjct: 258 DGALPQSLHGGEGLIRDYLLEEVIDCLPADVQAFLYDTAPQDRFCSELCDAVREAHDSAE 317

Query: 263 YLHDLQALGAFIQPWEDT-EWLQVFPPLADLLR-----DEPWPAKRSWHRRACQWFTAEQ 316
            L  LQA   F+ P +D   W +     +DLLR         PA  S H RAC+WF A+ 
Sbjct: 318 ILRYLQAHQVFLVPLDDQGHWYRYHHLFSDLLRTRRASSHVLPAA-SLHLRACRWFNAQG 376

Query: 317 DWQAAFEHALLAEEYEVAVSLLQHFSFEDLFRQQNAMLLLRLHEQHGDELMLGSAQLVGL 376
               A E AL A   +VA +L+Q+ S E L  +QN  +LLR      D L++ + +L+ L
Sbjct: 377 LIDEAVEQALRAGHLDVAANLVQNLSEEQLLAEQNVGMLLRWKMDLPDSLLISTPRLIVL 436

Query: 377 LTAALLFAGRFEQAAQCIQQLARFAPQPTAAKQRYLLARWQAQWGWLLHLGGDAERSREH 436
            + AL  A + + A +    L+RF P P+A  Q+ +LA+W A  G +    GD E ++ +
Sbjct: 437 YSWALGLACQLDAAEELSSYLSRFLPAPSATAQKSMLAQWLALSGIIARGRGDRELTQRY 496

Query: 437 FLEALHALPDSAWTSRLMCLSGLTQQALLRGELDVAQGLSREALCLARAHGSLLLEALLE 496
             EAL +LP   +  RLMCLS L+  A++  +L  A+GL+RE+L LA+  G+ L EAL  
Sbjct: 497 CSEALESLPQRRYGQRLMCLSTLSNLAIVDADLWRARGLNRESLELAQRVGNPLFEALAH 556

Query: 497 LDHAQLLEQRGAPYRAQSLLEKVQSM-----LLKQRLKAGPLVGRIALRQGHLALRQGQD 551
            D A++L+ RG   R  SL E  Q +     L  QRL A  +  R++L +G L L + Q 
Sbjct: 557 YDRARVLQARGEILR--SLDEVRQGLQRLHGLAPQRLYA--VRARLSLYEGFLLLVRLQP 612

Query: 552 SLAAECFEAGLKMCLHSQDKRVLYGFLGLALLAANRGDYAQAFVQLRDAERLMQQRQVPD 611
                   AGL      +D  VL G   +A     RGD+ +AF +L +AERLM    VP 
Sbjct: 613 DAGLARLRAGLAEARACRDISVLIGHCVIANFEGRRGDFPKAFAELAEAERLMHIWDVPP 672

Query: 612 TVYRAVLLLVSGHFWLQQGRAELTVEAVRRVLRHFRGPQAKQAPPATLELVPRLEYLLVL 671
             Y A++ L+    WL QGR +L    + R+ + + G  A  AP    E  P L   + L
Sbjct: 673 IYYLAMITLIKCELWLAQGRTDLADAWLTRLGQTYHGEHAAAAP----EFHPHLPQHIGL 728

Query: 672 AEVRLGGA-DQPVA---RLTALLETAHQRG-----MLCLETELRLVLGEVAWQVGDCALA 722
            +  L     QP A   RL  L   AH  G     ++ L   ++L+L E     G    A
Sbjct: 729 QQAALDATRHQPAAALQRLEELALQAHNSGRQMIALMALTQRVQLLLEE-----GQETKA 783

Query: 723 RRSLQTGLELAARCQVQ----------QAIRELRLRSP-GLLSE--LGMEPQAPV--SGA 767
           R      LE      +Q            +RE   + P GLLS+  L + P   V  + +
Sbjct: 784 RSVFTQALEAGIGGALQPFQRLLETHPDWMREQLAKDPHGLLSQSLLALLPAVVVVEAAS 843

Query: 768 VESPLSQRELEVLQLIALGNSNLEIADRLFISLHTVKTHARRIHSKLGVERRTQAVAKAK 827
               LS REL VLQLIA G SN EI++RLFISLHTVKTHA  I+SKLGVERRTQAVA+A+
Sbjct: 844 THETLSARELAVLQLIAQGCSNQEISNRLFISLHTVKTHASHINSKLGVERRTQAVARAQ 903

Query: 828 TLGLM 832
            L L+
Sbjct: 904 ELRLI 908