Pairwise Alignments

Query, 833 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 905 a.a., Transcriptional regulator, LuxR family from Pseudomonas putida KT2440

 Score =  340 bits (873), Expect = 2e-97
 Identities = 303/896 (33%), Positives = 426/896 (47%), Gaps = 88/896 (9%)

Query: 13  FMPRLSAHHLLRPRLAEPLLAAQV-RVKLLCAPAGSGKSALFAECALQAPKDCPVHWLPL 71
           F P L   H+ R RL + L A    R+ L+ APAG GKS+L  E     P+     WL L
Sbjct: 23  FRPPLPDGHVPRLRLCQRLEAGLGGRLLLVNAPAGFGKSSLAIEFCETLPEHWRSLWLGL 82

Query: 72  NGIALSPLDLCQRLAQNLDL--------------------PFIDEATL---LSDLARW-- 106
           +     P    +RL + L                      PF  E  L   L +LA +  
Sbjct: 83  SQRDADPGRFLERLLEGLQQYCPALGGQAMGLLKMRQRHQPFAFEEWLDGLLDELALYLQ 142

Query: 107 -QAPAWVFLDDFCRLPAPDTDALLDRLFTASSPALTWWLGTRRRPLCNWPRLLLDDELLE 165
              P  + LDD+     P  D  L        P L   + +R+RP  +  RL L  +L+E
Sbjct: 143 ADTPLLLVLDDYHLAQGPVLDRCLQFFLNHLPPGLVLLVTSRQRPGWHLARLRLSRQLVE 202

Query: 166 CGA-DLAFSPVEIQQLLTHAP----GQSVDQVLQFSAGWCAGARIALLG--DGHPEKTL- 217
               DL  +  E   ++   P    GQ++D ++Q S GW AG R   L   D   E+ L 
Sbjct: 203 LNEQDLRLTADESLAVIGRQPTGLRGQALDNLIQRSDGWVAGLRFWQLAASDSADEQALP 262

Query: 218 ----------LDYLQHELFSTLPPELAEAWRVLAHLPRFNAGLCEHLFGFGDGDQYLHDL 267
                      DYL  E+   LP ++       A   RF A LC+ + G  D    L  L
Sbjct: 263 QALHGGEGLIRDYLLEEVIDRLPADVQAFLDETACQERFCAPLCDAMRGRHDSAAVLSFL 322

Query: 268 QALGAFIQPWEDT-EWLQVFPPLADLLRD-EPWPAKRSWHRRACQWFTAEQDWQAAFEHA 325
           QA   F+ P ++   W +     +DLLR  +   ++ + H RAC+WF A+     A E A
Sbjct: 323 QAHQVFLVPLDEHGHWFRYHHLFSDLLRSRQASESQVALHLRACRWFEAQDLLDEAVEQA 382

Query: 326 LLAEEYEVAVSLLQHFSFEDLFRQQNAMLLLRLHEQHGDELMLGSAQLVGLLTAALLFAG 385
           L A   +VA  L+Q  S E L  +QN  +LLR      D L++ + +L+ L + AL  A 
Sbjct: 383 LRAGHLDVAADLVQSLSEEQLLAEQNVGMLLRWKMDLPDSLLISTPRLIVLYSWALGLAC 442

Query: 386 RFEQAAQCIQQLARFAPQPTAAKQRYLLARWQAQWGWLLHLGGDAERSREHFLEALHALP 445
           + + A +    L+RF P P+A  Q+ +LA+W A  G +    GD ER+  +  EAL +LP
Sbjct: 443 QLDAAEELAGYLSRFLPAPSATAQKSMLAQWLALSGVIARGRGDRERTLAYCGEALQSLP 502

Query: 446 DSAWTSRLMCLSGLTQQALLRGELDVAQGLSREALCLARAHGSLLLEALLELDHAQLLEQ 505
              +  RL+CLS L+  A+  G+   A+G +REAL LA+  G+ L EAL   D A++L  
Sbjct: 503 SKRYGQRLVCLSTLSNLAIADGDFWRARGWNREALELAQRVGNPLFEALAHYDRARVLHA 562

Query: 506 RGAPYRA----QSLLEKVQSMLLKQRLKAGPLVGRIALRQGHLALRQGQDSLAAECFEAG 561
           RG   RA    +  L+++Q  L  QRL A  +  R+ L +G+L + + Q +       AG
Sbjct: 563 RGEVLRALDEVRQGLQRLQG-LSAQRLYA--VRARLTLYEGYLLVSRLQPAQGRARLRAG 619

Query: 562 LKMCLHSQDKRVLYGFLGLALLAANRGDYAQAFVQLRDAERLMQQRQVPDTVYRAVLLLV 621
           L      +D  VL G   +A L    G +A+AF +L +AERLM    VP   Y A++ LV
Sbjct: 620 LGEARACRDISVLIGHCVIATLDGREGHFAEAFAELAEAERLMHIWDVPPVYYLAMITLV 679

Query: 622 SGHFWLQQGRAELTVEAVRRVLRHFRGPQAKQAPPATLELVPRLEYLLVLAEVRLG---- 677
               WL QGR +L    ++R+ + + G Q   AP    E  P L   + L +  L     
Sbjct: 680 KCELWLAQGRTDLAESWLQRLGQTYGGEQPAAAP----EFHPLLPLHIALQQAALDRIQL 735

Query: 678 GADQPVARLTALLETAHQRGMLCLETE-----LRLVLGEVAWQVGDCALARRSLQTGLEL 732
            +D  V RL  L++     G + L        L L+L E     G    A + L + LE 
Sbjct: 736 RSDDAVQRLACLVKRGQASGGMMLTVSALSQWLALLLDE-----GKEGQAAQLLPSLLE- 789

Query: 733 AARCQVQQAIRELRLRSPGLLSE--------------LGMEPQAPVSGAVE-SPLSQREL 777
           AA   V Q ++ L  + P  L E              L   P  P++       LS RE+
Sbjct: 790 AAHGGVMQPMQPLLEKHPQWLQEQLQAGAACPVQAELLKHLPPVPIASTGNGEALSGREM 849

Query: 778 EVLQLIALGNSNLEIADRLFISLHTVKTHARRIHSKLGVERRTQAVAKAKTLGLMA 833
            VL+LIA G SN +I++RLFISLHTVKTHA  I+SKLGVERRTQAVAKAK+LGL+A
Sbjct: 850 AVLELIAQGCSNQQISERLFISLHTVKTHASHINSKLGVERRTQAVAKAKSLGLLA 905