Pairwise Alignments

Query, 313 a.a., ubiquinol oxidase subunit II from Pseudomonas simiae WCS417

Subject, 313 a.a., cytochrome bo terminal oxidase subunit II from Pseudomonas putida KT2440

 Score =  472 bits (1214), Expect = e-138
 Identities = 231/316 (73%), Positives = 264/316 (83%), Gaps = 6/316 (1%)

Query: 1   MSKNRYPRLLGFLPLLGMMLMLGGCKWTLMDPKGQIGLDQRNLIITATLLMLLVVVPVII 60
           MSK RYPRL G LP LGM+L L GC WTL+DPKGQ+G++Q+NLI+ AT LMLLVV+PVII
Sbjct: 1   MSKKRYPRLFGILPFLGMLL-LSGCNWTLLDPKGQVGIEQKNLILIATGLMLLVVIPVII 59

Query: 61  MTFAFAWKYRASNTNATYAPKWSHSTKIEIAVWLVPILIIIALGYITYKSTHELDPYRPL 120
           MT AFAWKYRASN  ATY P WSHSTKIE AVW++PILIIIALGY+TY STH+LDPYRPL
Sbjct: 60  MTLAFAWKYRASNKAATYTPDWSHSTKIEAAVWIIPILIIIALGYVTYHSTHKLDPYRPL 119

Query: 121 ESDVKPINIEVVALDWKWLFIYPDLGIATVNEIQFPENTPLNFRITSDAVMNSFFIPALG 180
           +SDVKPI I+VVALDWKWLFIYP+ GIATVN+I FP NTP+NFR+TSDAVMNSFFIP LG
Sbjct: 120 DSDVKPIQIDVVALDWKWLFIYPEQGIATVNKIVFPANTPVNFRVTSDAVMNSFFIPGLG 179

Query: 181 GQIYAMAGMQTRLHLIANEKAEMEGISANYSGAGFTGMKFKAISTSQEGFNAWVAEVKAA 240
           GQIYAMAGM T+LHLIANE  E +GISANYSGAGFTGMKFKA +TSQE F+ WVAEVK +
Sbjct: 180 GQIYAMAGMTTKLHLIANENGEFDGISANYSGAGFTGMKFKATATSQEDFDKWVAEVKQS 239

Query: 241 PKQLDQAEYDALTKPSQNNPVALYSAYEPNLFQKIVDKYEGMKPGKPVKHEK---KEVAA 297
           PK+LD+AEYDAL KPS+NNPVALYS   P  FQ IVDKYEGM  G+   HE+   K++A 
Sbjct: 240 PKKLDKAEYDALAKPSENNPVALYSEASPEQFQLIVDKYEGMNRGR--SHEEAGSKDLAT 297

Query: 298 VEGSDTGSHSTAGAEE 313
            +G ++     AGAEE
Sbjct: 298 TKGVESSMQPAAGAEE 313