Pairwise Alignments

Query, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 305 a.a., transcriptional activator of gcdH, LysR family from Pseudomonas putida KT2440

 Score =  199 bits (505), Expect = 9e-56
 Identities = 109/295 (36%), Positives = 163/295 (55%), Gaps = 5/295 (1%)

Query: 3   KRLTPSMTALQCFEAAARHLSFTRAAEELHLTQSAVSKQVAQLEEMLCHNLFERVRQRLY 62
           +R  PS  AL CFEAAAR+ SFT+AA+EL LTQ AV +Q+  LE  L   LF R R+ + 
Sbjct: 2   RRKIPSTAALICFEAAARNESFTKAAQELALTQGAVCRQIGGLEAFLNVELFRRSRRGVR 61

Query: 63  LSPAGSLYLAEVHKILTQVDISSRYILTYGGETEVLRIATQPTFGDRWLVPKLKDFAALH 122
           L+ AG  Y  +V   L  V+  +  ++   G   V+ +A  PTFG +WL+P+LKDF   H
Sbjct: 62  LTEAGLSYSRQVAAQLDAVERDTLSVMRQQG-ANVIELAVVPTFGTQWLLPRLKDFQQRH 120

Query: 123 PNIHLDVRNELEPFDVLQAKADIAFFFGQGSWPGATCIELFREAVVPVCAPGFVAEGSHA 182
           P + +++ N   PF       D A +FG   W G    +L  E  VPVC+P  +      
Sbjct: 121 PEVTVNLTNRTRPFLFADTTFDAAIYFGDADWSGTQSHQLMGENPVPVCSPALLNGQGML 180

Query: 183 SSRHT----LLQCTSRPEAWHEWFLEQGLHSQNSYHGPRFDTFYMCIRAAQSGYGVALVP 238
            +RH     LLQ ++RP AW +WF   G++ +    GPR++ F M  +AA    G+AL+P
Sbjct: 181 EARHIAQLPLLQQSTRPYAWRQWFGSVGMNVERDMTGPRYELFSMLAQAAMHDMGIALIP 240

Query: 239 QYLVADELAQGSLMIPWDYAMPSSGAHFIAHAEHAGEIPKVKAFLNWMVDYVGAH 293
            +L+  EL +G L++   +A+ S  A+++   E   E   ++AF +W+V    A+
Sbjct: 241 PFLIQRELEEGRLVVANRHALSSDKAYYLMIPERKVESASLRAFRDWLVSQAQAY 295