Pairwise Alignments

Query, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 299 a.a., Glycine cleavage system transcriptional activator from Azospirillum sp. SherDot2

 Score =  142 bits (358), Expect = 9e-39
 Identities = 93/297 (31%), Positives = 142/297 (47%), Gaps = 12/297 (4%)

Query: 4   RLTPSMTALQCFEAAARHLSFTRAAEELHLTQSAVSKQVAQLEEMLCHNLFERVRQRLYL 63
           R  P +  L  FE AARH SFT+AAEEL +TQ AVS+QVA LE+ L   LF R  + L L
Sbjct: 6   RQVPPLNPLHVFECAARHGSFTKAAEELSVTQPAVSRQVALLEDYLGVRLFHRETRGLTL 65

Query: 64  SPAGSLYLAEVHKILTQVDISSRYILTYGGETEVLRIATQPTFGDRWLVPKLKDFAALHP 123
           +  G  Y A++      +  ++  +++       L++    TF  +WL+ +L      HP
Sbjct: 66  TSEGKRYAAQIAPAFRCIAEATSELVS-ARAAAPLKLQVYATFMAKWLMRRLPQLQTNHP 124

Query: 124 NIHLDVRNELEPFDVLQAKADIAFFFGQGSWPGATCIELFREAVVPVCAPGFVAEGSHAS 183
           ++ L  R  + P D  +   D A   G G W G   + LF + ++PVC+P  +A G    
Sbjct: 125 DLRLRTRTAVAPVDFARDNVDAAIQLGTGDWQGMDSVFLFSDEILPVCSPALLAGGPPVK 184

Query: 184 S-----RHTLLQCTSRPEAWHEWFLEQGLHSQNSYHGPRFDTFYMCIRAAQSGYGVALVP 238
           +     R+ LL    R   W +W    GL    +     F +  +  +AA  G G+A+  
Sbjct: 185 APADLLRYPLLHSHYRRRDWPDWLEAAGLTMAETQEPLMFPSSLLTYQAALDGLGIAMGQ 244

Query: 239 QYLVADELAQGSLMIPWDYAMPSS-GAHFIAHAEH--AGEIPKVKAFLNWMVDYVGA 292
             ++  EL  GSL+ P D  +    G +F+    H     I KV+   NW+++ V A
Sbjct: 245 PAMLETELRSGSLVCPIDRPLRRDLGYYFVVPPNHQDRARIAKVR---NWLLEQVAA 298