Pairwise Alignments

Query, 342 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 275 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 66/242 (27%), Positives = 110/242 (45%), Gaps = 12/242 (4%)

Query: 8   LAAIGATAVLGLASTAEAGTTLDAIQKKGFIQCGV-SDGLPGFGVPDSKGKMTGIDVDVC 66
           +AA  A + L L + A A    D I+KKG +  GV     P   +     ++ G +VD+ 
Sbjct: 6   IAAAAAASALLLGTVAHADQLAD-IKKKGELVVGVLGTDEPATFIDPKTRQIVGYEVDLV 64

Query: 67  HAVAAAVFGDASKVKFTQLTAKERFTALQSGEIDLISRNTTWTSSRDSGMGLVFTGVTYY 126
           +A+A  +     K    Q+    R   LQ G +DL++   T    R++ +   F+  T+ 
Sbjct: 65  NAIAKKI---GVKPVLKQIAVAARIPELQQGHVDLVAAGLTHNKEREAQID--FSLTTFV 119

Query: 127 DGIGFLVNNKLGVTAAKQLDGATVCIQAGTTTELNVSDYFRTHGMKYTPITFDTADESAK 186
            G   +V    G+T   QL G  V    G T E N+    R        +TFDT+ ++ +
Sbjct: 120 TGQKAIVKKDSGITEVPQLAGKKVLTIRGGTQEPNI----RKAVPNVDVVTFDTSQQAFQ 175

Query: 187 GLEAGRCDVLTTDQSGLYAQRIKMA-QPDEFVVLPEVISKEPLGPLVRKGDDEWFSIVKW 245
            L+ G+      D++ L     K+  Q  ++VVL + +S E L   ++KG+    ++V  
Sbjct: 176 ALQQGKGVGYVDDEAALLRSYAKLGPQKAQYVVLKQNLSTEALAIGIKKGETALKAVVDD 235

Query: 246 TL 247
           TL
Sbjct: 236 TL 237