Pairwise Alignments

Query, 747 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 755 a.a., putative Phytochrome family protein from Pseudomonas putida KT2440

 Score =  371 bits (953), Expect = e-107
 Identities = 267/762 (35%), Positives = 391/762 (51%), Gaps = 55/762 (7%)

Query: 8   ELLANCADEPIRFPGAIQPHGVLLTLSEPDLNIIQVSANVGSLFGHAPEALLGQPLHTLV 67
           + +  CA EPI+ PG+IQPHG LL L   DL ++Q S NV        E  LG P   L+
Sbjct: 16  DAMERCAQEPIQVPGSIQPHGFLLVLDATDLRVLQASENV--------EHWLGLPARELI 67

Query: 68  GAEHAKAVAVMADHNTFFDAPPLHVTF----------NGAEFEGLLHR----HQNVLVLE 113
           G   A  V    D +      P    F           GA    LLH     H  VL+ E
Sbjct: 68  GCHFADLVHEGFDLHAHLTRLPEDEVFPFHIGDVRLRQGAPISALLHMLVHCHDQVLIAE 127

Query: 114 FEPLLKDFRPRALKGRTSD---LGKMLQRLQSAKTLQALYEISVNEIQAMTGYDRVLIYR 170
           FEP      P  L G+      +   +  LQ A +++ L + +V +++ +TG+ RV  YR
Sbjct: 128 FEP---PRLPADLVGQGDYYPLVRSFVASLQVASSIEDLLQQTVLQLKRITGFGRVKAYR 184

Query: 171 FEDEGHGQVIAEASAPSMELFNGLFFPASDIPEQARELYRTNWLRIIPNAAYEPVPLLPK 230
           F+ EG+GQV+AE   P    + GL FPA+DIP QARELYR N +R+I +A Y+P PLLP 
Sbjct: 185 FDAEGNGQVLAEVVDPGYPSYAGLCFPAADIPRQARELYRVNRIRVIEDANYQPSPLLPA 244

Query: 231 LRPDTGQPLDLSFATLRSVSPIHCQYMQNMGVLSSMSISLMKGDTLWGLISCGNREPLLV 290
             P TG+PLD+SFA LRSVSP+H QYM+NMG L+SMS+S++    LWGLISC +++P  V
Sbjct: 245 TNPRTGKPLDMSFAALRSVSPVHLQYMRNMGTLASMSLSIVVDGQLWGLISCHHQQPRPV 304

Query: 291 PNDLRTACQTIGQVLSLQISAMEALDLSRQREEKVEALALLDQAMKRSEENVFDGLAQQG 350
               RTAC+ +  VLSLQI + E+   +R+     + +  +  +M    ++V DGL    
Sbjct: 305 DLRTRTACELLASVLSLQIESRESHASTRKLLTLRQHIVRMISSM-ADHDSVSDGLRDLP 363

Query: 351 QLLMDLTLSGGVAIIEDKQLHRYGNCPEPAQIRALHKWL-QEGGEPVFSSHKLSSVYPPA 409
           ++L+    + G A+I  ++    G  P  AQ+ AL  WL Q   + VF S  L       
Sbjct: 364 EVLLAFADAQGAAVISAERCDLIGQTPPEAQVTALVHWLGQRDEDKVFHSDNLRRDITEL 423

Query: 410 AEFQQVASGVLAMSLPKPVDNGVLWFRPEVKENINWSGDPRKPLDLENSDSGLRLRPRTS 469
            E    A GVLA+++ +   + +LWFRPE    +NW+G P K +  + +     L PR S
Sbjct: 424 PELANHAGGVLAVAISQIHSHYLLWFRPEQIRTVNWAGQPTKQVGPQGN-----LDPRHS 478

Query: 470 FEIWKVEMAGISTKWSHGDRFAANDLRRSALENDLARQVLREQQA---VRARDELVAV-- 524
           FE W+ E  G S  W         +LR + L   L +     Q A    R+  EL A   
Sbjct: 479 FERWQEEQRGYSQAWDPLVIEGVIELRAAVLGIVLRKAEELAQLAGELRRSNKELEAFSY 538

Query: 525 -VSHDLRNPMTVISMLCGMMQQAFSSDGPHTSRRISSAIDTMQQAAGRMNVLLEDLLDTS 583
            VSHDLR P+  I+   G  +     +G   S R    +  + +AA     L+++LL+ S
Sbjct: 539 SVSHDLRAPLRHIA---GYTELLGEIEGQGLSERGKRFLQHIGEAAHFAGSLVDNLLNFS 595

Query: 584 KIEAGRYVVRPVSLDVSQMFDEAYSLLAPLAMEKGIDLSFNAEPGLQINADPERLFQVLS 643
           ++  GR  +R   +D++ + +   S LAP    +G  + ++  P  ++  DP  +   L 
Sbjct: 596 QM--GRSALRLSDVDLNALVEAIRSELAP--DYEGRAIVWDIAPLPKVIGDPAFINMALH 651

Query: 644 NLIGNAIKFTPRQ--GNIGISAMSSGEEIVFSVRDSGEGI---APEQLPHVFDRYWTQTE 698
           NLI NAIK+T  +    I ISA+   EE    +RD+G G       +L  VF R     +
Sbjct: 652 NLIANAIKYTRGRTPARIEISAVQHPEETEVCIRDNGVGFDMAYANKLFGVFQRLHRMED 711

Query: 699 NNPTGSGLGLYITQGIVQAHGGKIVAESEVGRGSEFRFTVPK 740
               G+G+GL   + I++ H G++ A  +V +G+ F FT+P+
Sbjct: 712 FE--GTGIGLASVRRIIERHDGRVWATGQVDQGASFHFTLPR 751