Pairwise Alignments

Query, 747 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

 Score =  127 bits (320), Expect = 2e-33
 Identities = 135/546 (24%), Positives = 254/546 (46%), Gaps = 86/546 (15%)

Query: 257 MQNMGVLSSMSISLMKGDTLWGLISCGNREPLLVPNDLRTACQTIGQVLSLQISAMEALD 316
           +  +G+ S + +  +    L  L+  G+    L  NDLRT     G++++ Q++ + A  
Sbjct: 2   LDRLGIRSRVLLLALLPAGLMALV-LGSYFTWLQQNDLRTQLLQRGKMIAEQLAPLAAPA 60

Query: 317 LSRQREEKVEALAL--LDQAMKRSEENVFDG---LAQQGQLLMDLTLSGGVAIIEDKQLH 371
           ++R    ++E +A   L+QA  R+   +      LA  G  +++L  SGG      + L 
Sbjct: 61  MARLAPAQLERIAAQTLEQADVRAVAFLAPDRTRLAHAGPSMLNLPPSGGTGT---QLLQ 117

Query: 372 RYGNCPE------------------PAQIRALHKWLQ----------EGGEPVFSSHKLS 403
           R GN                     PA+   L  W++           G   +F+S  L 
Sbjct: 118 RSGNDATRYLMPVFGHHRDLATDAVPAEAERLLGWVEIELSHDGTLLRGYRNLFTSLLLI 177

Query: 404 SVYPPAAEFQQVASGVLAMSLPKPVDNGVLWFRPEVKENINWSGDPRKPL----DLENSD 459
                        SG+LA+ + + +++ +   +  V +  +   + R P     +L+   
Sbjct: 178 LAC-------LALSGLLALRMSRTINDPIERIKHAVNQLKDGHLEERLPTMGSHELDELA 230

Query: 460 SGLRLRPRTSFEIWKVEMAGISTKWSHGDRFAANDLRRSA-------LENDLARQVLREQ 512
            G+     T        +     +  H    A  D+R++        +E D+AR+   E 
Sbjct: 231 HGINRMAET--------LQNAHEELQHSIDQATEDVRQNLETIEIQNIELDMARKEALE- 281

Query: 513 QAVRARDELVAVVSHDLRNPMTVISMLCGMMQQAFSSDGPHTSRRISSAIDTMQQAAGRM 572
            A R + E +A +SH++R P+  I     ++Q++        + R    ++T++++A  +
Sbjct: 282 -ASRIKSEFLANMSHEIRTPLNGILGFTHLLQKS------EMTPRQLDYLNTIEKSADNL 334

Query: 573 NVLLEDLLDTSKIEAGRYVVRPVSLDVSQMFDEAYSLLAPLAMEKGIDL--SFNAEPGLQ 630
             ++ ++LD SKIEAG+ V+  +  ++  +  +  ++LAP A  K ++L      +    
Sbjct: 335 LGIINEILDFSKIEAGKLVLDSIPFNLRDLIQDTLTILAPAAHAKQLELLSLIYRDTPAS 394

Query: 631 INADPERLFQVLSNLIGNAIKFTPRQGNIGISAMSSGE-----EIVFSVRDSGEGIAPEQ 685
           +  DP RL Q+L+NL+ NAIKFT R+G I + AM   E     ++  SV+D+G G++P+ 
Sbjct: 395 LVGDPLRLKQILTNLVSNAIKFT-REGTIVVRAMLEDEHEDCAQLRISVQDTGIGLSPQD 453

Query: 686 LPHVFDRYWTQTENN----PTGSGLGLYITQGIVQAHGGKIVAESEVGRGSEF--RFTVP 739
           +  +F  + +Q +N+    P G+GLGL I++ +++  GG+I  +S  G GS+F     +P
Sbjct: 454 VRTLFQAF-SQADNSLARQPGGTGLGLVISKRLIEQMGGEIGVDSTPGEGSQFWISLNLP 512

Query: 740 KVIDDS 745
           K  DD+
Sbjct: 513 KAHDDA 518