Pairwise Alignments

Query, 747 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1373 a.a., Sensor kinase protein RcsC from Alteromonas macleodii MIT1002

 Score =  131 bits (329), Expect = 3e-34
 Identities = 81/251 (32%), Positives = 141/251 (56%), Gaps = 20/251 (7%)

Query: 499  ALENDLARQVLREQQAVRARDELVAVVSHDLRNPMTVISMLCGMMQQAFSSDGPHTSRRI 558
            A  NDL + + + ++A + + E +A +SH++R PM  +  + G+++++      + +   
Sbjct: 812  AQANDLKKALEQAEEATKLKSEFLANMSHEIRTPMNGVIGMLGLLKKS------NLTTEQ 865

Query: 559  SSAIDTMQQAAGRMNVLLEDLLDTSKIEAGRYVVRPVSLDVSQMFDEAYSLLAPLAMEKG 618
            S  ++    +A  +  L+ D+LD SKIEA +  +  V  DV ++ +     +A LA EKG
Sbjct: 866  SQRVNIASSSANSLLALINDILDFSKIEADKLEIESVEFDVRELIESIAQSVAHLAQEKG 925

Query: 619  ID--LSFNAEPGLQINADPERLFQVLSNLIGNAIKFTPRQGNIGISA------MSSGEEI 670
            +D  +  +     +IN+DP R+ Q+L+NL+ NA+KFT  QG + ++A        +   +
Sbjct: 926  LDVVVDLSKVSESKINSDPSRIQQILTNLLSNAVKFT-EQGELSVTAELLPTNNQNTALM 984

Query: 671  VFSVRDSGEGIAPEQLPHVFDRYWTQTENNPT----GSGLGLYITQGIVQAHGGKIVAES 726
              +V D+G GI   +LPH+FD + TQ + + T    G+GLGL IT+ + Q  GG I   +
Sbjct: 985  HIAVADTGIGIPASKLPHLFDAF-TQVDASTTRRYGGTGLGLSITKKLCQLLGGDISVTT 1043

Query: 727  EVGRGSEFRFT 737
            E+G+GS F  T
Sbjct: 1044 ELGKGSRFDVT 1054