Pairwise Alignments

Query, 622 a.a., preprotein translocase subunit SecD from Pseudomonas simiae WCS417

Subject, 620 a.a., Sec Translocation Complex SecD subunit from Pseudomonas putida KT2440

 Score = 1022 bits (2642), Expect = 0.0
 Identities = 527/623 (84%), Positives = 574/623 (92%), Gaps = 4/623 (0%)

Query: 1   MLNKYPLWKYVLILAVLAIGFIYSAPNLYPDDPAIQISGASTTLQVNQADLERASKALND 60
           MLNKYPLWKY LI+ VL +GFIYSAPNLYPDDPA+QISGAS+ LQVNQADL+R SKAL D
Sbjct: 1   MLNKYPLWKYALIVLVLVVGFIYSAPNLYPDDPAVQISGASSALQVNQADLDRVSKALVD 60

Query: 61  AGIQVKAATLAAGAKG-GLLRLTKQEDQLPAKDVVRKVMGDDYVVALNLAQTTPQWLRSI 119
           A I VK A+L  G KG GL+RLT QEDQLPAKDVVRK +GDDYVVALNLAQTTPQWLR++
Sbjct: 61  AKIAVKGASL--GEKGSGLIRLTNQEDQLPAKDVVRKALGDDYVVALNLAQTTPQWLRNL 118

Query: 120 GAHPMKLGLDLSGGVHFLLEVDMDKALDARLKVYEGDVKSLLRKERLRYRSLPQLNGAIQ 179
           GA PMKLGLDLSGGVHFLLEVDMDKA+ AR+KVYEG+VK+LLRKER+RYRSLPQ +G I 
Sbjct: 119 GASPMKLGLDLSGGVHFLLEVDMDKAMTARMKVYEGEVKTLLRKERVRYRSLPQQDGGIM 178

Query: 180 LGFSDEASREQARALIRKNFNDFDIVPADLNGQAVLRLAMSPAKIAEIREYSIKQNLTTV 239
           LGF+D+A+REQARALIRKNFNDFD+   D N  AVLRLA++ AK+AEIREYSIKQNLTTV
Sbjct: 179 LGFADDATREQARALIRKNFNDFDLTTTDRNELAVLRLALTQAKVAEIREYSIKQNLTTV 238

Query: 240 RNRVNELGVAEPIVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRLAAEPGATRATA 299
           RNRVNELGVAEP+VQRQGANRIVVELPGVQDTAEAKRILGKTANLEFR  AEPGA++AT 
Sbjct: 239 RNRVNELGVAEPLVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRFGAEPGASKATT 298

Query: 300 EEFEFREGNRPPALIERGLIITGDQVTDAKAGFGEHGTPEVNIRLDGHGGELMSRATRSN 359
           E FEFREG R  A +ERGLIITGDQVTDA+A F EHG P+VNIRLDGHGGELMSRATRSN
Sbjct: 299 EVFEFREGGRSAA-VERGLIITGDQVTDAQASFDEHGRPQVNIRLDGHGGELMSRATRSN 357

Query: 360 VGRSMAVIFIEQRPITTYTKQMVNGVEKDVPVQTFKEEKKIISLATIQSPLGAQFRITGL 419
           VGRSMAVIFIEQ+P+T Y KQ V GVEKDV VQ+F EEKKIISLATIQSPLG+QFRITGL
Sbjct: 358 VGRSMAVIFIEQKPVTRYVKQAVGGVEKDVAVQSFVEEKKIISLATIQSPLGSQFRITGL 417

Query: 420 NGQGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNITKGVDAALWGMLFVSLFIIAI 479
           NGQGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNITKG+DA+LWGMLFVSLFIIAI
Sbjct: 418 NGQGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNITKGIDASLWGMLFVSLFIIAI 477

Query: 480 YRFFGVIATVALAGNMVMLLALMSLLGATLTLPGIAGIVLTMGMAVDANVLIFSRIREEI 539
           YR FGV+AT+ALAGNMV+LLALMSLLGATLTLPGIAGIVLTMGMAVDANVLIFSRIREEI
Sbjct: 478 YRAFGVLATIALAGNMVLLLALMSLLGATLTLPGIAGIVLTMGMAVDANVLIFSRIREEI 537

Query: 540 AAGMTVQRAINEGFGRAFTAILDSNLTTLLVGGILFAMGTGPVKGFAVTMSLGIFTSMFT 599
           AAGM+VQRAI+EGF RA++AI+D+NLTTLLVGGILFAMGTGPVKGFAVTMSLGIFTSMFT
Sbjct: 538 AAGMSVQRAIHEGFNRAYSAIVDANLTTLLVGGILFAMGTGPVKGFAVTMSLGIFTSMFT 597

Query: 600 AIMVTRAMVNLIFGGRDFKKLWI 622
           A+MVTRA+VNL  GGRD KKLW+
Sbjct: 598 AVMVTRALVNLTCGGRDIKKLWV 620