Pairwise Alignments

Query, 382 a.a., 50S rRNA methyltransferase from Pseudomonas simiae WCS417

Subject, 348 a.a., Probable RNA methyltransferase PA1839 from Variovorax sp. SCN45

 Score =  148 bits (373), Expect = 3e-40
 Identities = 92/271 (33%), Positives = 141/271 (52%), Gaps = 17/271 (6%)

Query: 79  SDGTRKWVVRVASGSCVETVYIPQGKRGTLCVSSQAGCALDCSFCSTGKQGFNSNLTAAE 138
           +DG+ + +V +A G  VE+V +P   R  LCVSSQ GCA+ C FC TG+ G    + +AE
Sbjct: 72  ADGSERLLVALADGQTVESVLLP---RDGLCVSSQVGCAVGCQFCMTGRDGLLRQVGSAE 128

Query: 139 VIGQVWIANKSFGSVPATVDRAITNVVMMGMGEPLLNFDNVISAMHLMMDDLGYGISKRR 198
           +I QV +A          + R +  VV MGMGEP  N DNV+ A+ L+   +G  +  + 
Sbjct: 129 IIAQVALAR---------MRRPVRKVVFMGMGEPAHNLDNVLEAIELL-GTVG-NVGHKN 177

Query: 199 VTLSTSGVVPMIDELAKH-IDVSLALSLHAPNDALRNQLVPINKKYPLKMLLESCQRYMA 257
           +  ST G   + + L +  +  +LALSLH     LR +L+P       + L+   +RY  
Sbjct: 178 LVFSTVGDPRVFNRLLQERVRPALALSLHTTKAELRRKLLPRAPNMTPEELVAEGERYAR 237

Query: 258 TLGEKRVLTIEYTLLKDINDKVEHAVEMIELLKDTPCKINLIPFNPFPHSGYERPSNNAI 317
             G    +  ++TLL+ +ND  +    ++ LL    C +N+IPFN      + RPS    
Sbjct: 238 ATGYP--IQYQWTLLEGVNDGQDEIDGIVRLLSGKYCVLNMIPFNAVDGVAFSRPSWERC 295

Query: 318 RRFQDQLHQAGYNVTVRTTRGEDIDAACGQL 348
            +    LH+ G    +R + G+D+D  CGQL
Sbjct: 296 EQVARTLHERGILTKLRNSAGQDVDGGCGQL 326