Pairwise Alignments

Query, 252 a.a., pilus assembly protein PilW from Pseudomonas simiae WCS417

Subject, 284 a.a., Type IV pilus biogenesis protein PilF from Variovorax sp. SCN45

 Score =  111 bits (277), Expect = 2e-29
 Identities = 73/253 (28%), Positives = 119/253 (47%), Gaps = 15/253 (5%)

Query: 11  VTGLAAGCVSSGHESP----LQTGKG-----------REEARVAYVQLGLGYLQQGMSEH 55
           VT L AGCVS+   +       +GKG           R+      ++L  GY +QG +  
Sbjct: 25  VTFLLAGCVSTRTTTTSLADTSSGKGVDIVTESDESSRQRRARLRMELASGYFEQGQTNV 84

Query: 56  AKVPLKKALELDSDDPDANGALALVFQAQAEPELAEQYFHKALAARPADPRLLNNYGSFL 115
           A   +K+AL  D ++ DA     LV+    +  +AE  F +A+A  P DP   +NYG  L
Sbjct: 85  ALDEIKQALAADPNNSDAYNLRGLVYMRLDDAGMAEDSFRRAIAINPRDPNTRHNYGWLL 144

Query: 116 FEQTRYDQAALYFQQASTDTLYPERSRVFENLGVTSMRLGQRDSARQHLEKALHLNGRQP 175
            +Q RY  AA  F +A     Y +R++     GV  ++ GQR  A + L++A  ++   P
Sbjct: 145 CQQNRYGDAATQFNEALAVPSYADRAKTLMTRGVCELKAGQRAQAERTLQQAYEIDASNP 204

Query: 176 RALLEMAELSYEDRHYVPARDYYERFSLLSGQNARSLLLGVRLATVHEERDTAARFGQQL 235
                +A +  +   +  A+ Y  R +     +A +L LG+++      R+  A+ G QL
Sbjct: 205 VVGFNLALVLAQREEWSRAQFYIRRVNNSPSASAETLWLGIKIERKLNNREALAQLGGQL 264

Query: 236 ERLYPGTPEYQQY 248
           +R +P + E   Y
Sbjct: 265 QRRFPQSREASAY 277