Pairwise Alignments

Query, 369 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Pseudomonas simiae WCS417

Subject, 424 a.a., (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) (EC 1.17.7.3) from Variovorax sp. SCN45

 Score =  202 bits (513), Expect = 2e-56
 Identities = 144/398 (36%), Positives = 206/398 (51%), Gaps = 53/398 (13%)

Query: 20  VPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDAAEAFGRIKQL- 78
           V VGGDAP+ VQSMTN+DT D   T  Q+  L  AG ++VR++V   +AA     I++  
Sbjct: 30  VTVGGDAPVRVQSMTNTDTVDAIGTAIQVKELALAGSEMVRITVNTPEAAAQVPYIREQL 89

Query: 79  ----VKVPLVADIHFDYKIALRVAELGVDCL---RINPGNIGREDR----VRAVVDAARD 127
               V VPL+ D H++    L       + L   RINPGN+G+ D+       ++DAA  
Sbjct: 90  DRMGVDVPLIGDFHYNGHRLLTDYPACAEALSKYRINPGNVGKGDKKDKQFGQMIDAAMR 149

Query: 128 RGIPIRIGVNAGSLEKDL-------QKKYGEPTPA------ALVESALRHVEHLERLNFQ 174
              P+RIGVN GSL+++L         +  +P  A      AL+ SA+   +  E +   
Sbjct: 150 WNKPVRIGVNWGSLDQELLASLMDTNSQRAQPWDAKQVMYEALITSAIESAKLAESMGMA 209

Query: 175 DFKV--SVKASDVFMAVEAYRLLAKEIVQPLHLGITEAGGLRSGTVKSAVGLGMLLAEGI 232
             +V  S K S V   +  YR LA+    PLHLG+TEAG    GTV SA  L +LL EGI
Sbjct: 210 GNQVILSCKVSGVQDLISVYRELARRCEYPLHLGLTEAGMGTKGTVASATALSILLQEGI 269

Query: 233 GDTIRISLAADP----VEEVKVGYDILKSLRLRSRGINFIACPSCSRQNFDVVKTMNDLE 288
           GDTIR+SL   P     +EV +  +IL++L LR    +  ACP C R       T  +L 
Sbjct: 270 GDTIRVSLTPQPGESRTQEVLIANEILQALGLRVFVPSVTACPGCGR---TTSTTFQELA 326

Query: 289 LRLEDLL--------------VPLDVAVIGCVVNGPGEAKEAHVGL----TGGTPNL-IY 329
            +++D L                L VAV+GC+VNGPGE+K A +G+    TG  P   ++
Sbjct: 327 KQIDDYLRMQMPVWRKKYPGVETLKVAVMGCIVNGPGESKHADIGISLPGTGEAPAAPVF 386

Query: 330 IDGKPSQKLTNDNLVDELEKLIREKAAEKVAADAALIA 367
           IDG+ +  L  DN+ +E  +L+     ++   + A+ A
Sbjct: 387 IDGEKALTLRGDNIANEFHQLVETYIEKRFGGEHAVAA 424