Pairwise Alignments

Query, 369 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Pseudomonas simiae WCS417

Subject, 661 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  170 bits (430), Expect = 1e-46
 Identities = 105/285 (36%), Positives = 155/285 (54%), Gaps = 34/285 (11%)

Query: 9   RRVSRKIWVGSVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDA 68
           RR +  + +G V +GGD PI VQSMT  DT D   ++ +  R+  +G +++R++ P +  
Sbjct: 21  RRKTIPVQIGDVVIGGDNPIVVQSMTTKDTMDTEGSIEECIRMIKSGCELIRITAPSIKE 80

Query: 69  AEAFGRIKQLVK-----VPLVADIHFDYKIALRVAELGVDCLRINPGNIGRE-------- 115
           AE    IK  +      VPLVADIHF    A   A + V+ +RINPGN   +        
Sbjct: 81  AENLRHIKAGLAERGYHVPLVADIHFTPNAAEIAARI-VEKVRINPGNYADKKKFEEIEY 139

Query: 116 -------------DRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESAL 162
                        +R   +V   ++ G  +RIG N GSL   +  +YG+ TP  +VESAL
Sbjct: 140 TDESYQAELERIRERFLPLVKICKEHGTAMRIGTNHGSLSDRIMSRYGD-TPLGMVESAL 198

Query: 163 RHVEHLERLNFQDFKVSVKASDVFMAVEAYRLLAKEIVQ------PLHLGITEAGGLRSG 216
             +   E  ++ D  +S+K+S+  + V+AYRLL +++ +      PLHLG+TEAG    G
Sbjct: 199 EFLRICEEEHYHDIVISMKSSNTQVMVQAYRLLVQKLDEGGFQPYPLHLGVTEAGDGEDG 258

Query: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEVKVGYDILKSLRLR 261
            VKSAVG+G LL +G+GDT+R+SL  DP  E  V   ++    LR
Sbjct: 259 RVKSAVGIGTLLEDGLGDTVRVSLTEDPEFEAPVAKALIDRYALR 303



 Score = 73.9 bits (180), Expect = 1e-17
 Identities = 59/178 (33%), Positives = 90/178 (50%), Gaps = 22/178 (12%)

Query: 194 LLAKEIVQPLHLGITEAGGLRSGT----VKSAVGLGMLLAEGIGDTIRISLA--ADP--- 244
           L+  EI  P+   +TEAG          + +A  LG LL +G+GD + + L   A P   
Sbjct: 477 LINAEIRLPV---VTEAGYKEQDADQTMLYAATDLGGLLIDGLGDGVMLGLEEKAAPDRD 533

Query: 245 --VEEVK----VGYDILKSLRLRSRGINFIACPSCSRQNFDVVKTMNDLELRLEDLLVPL 298
             +E +K    V + +L++ R R     +I+CPSC R  FD+ +T   +  R  D L  +
Sbjct: 534 ALMETIKLHNSVSFGVLQAARTRMSKTEYISCPSCGRTLFDLQETTAMIRKR-TDHLKGV 592

Query: 299 DVAVIGCVVNGPGEAKEAHVGLTG-GTPNLIYIDGKPSQK--LTNDNLVDELEKLIRE 353
            + ++GC+VNGPGE  +A  G  G G   +    GK   K  + ++  VDEL  +IRE
Sbjct: 593 KIGIMGCIVNGPGEMADADYGYVGSGKGKITLYKGKEVVKRAVPSEQAVDELINIIRE 650