Pairwise Alignments

Query, 255 a.a., permease from Pseudomonas simiae WCS417

Subject, 265 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 71.2 bits (173), Expect = 2e-17
 Identities = 69/229 (30%), Positives = 108/229 (47%), Gaps = 10/229 (4%)

Query: 24  VVVAYIVFGIAGFGTALVAGPILILFMPLSKIIPLLVLLDFVAAFGNLLQSRRDVNKPEL 83
           V  A IV G AGFG + +    + L +  + ++P + +L+ +A+   L    RDV+ P L
Sbjct: 23  VFAAGIVRGFAGFGFSAITVAGMSLVVSPALVVPAIFMLEILASLSQLRGIARDVDMPWL 82

Query: 84  LRLLPCMAIGCTLGVVFLLNLHSDLLLLLMGLFISAYAIYSLAVKARPTQLAS-AWSIPM 142
             L+    I   +GV  L  L    L LL+G  + + A+  L   AR T + +    +  
Sbjct: 83  SWLMLGNLICIPIGVALLAWLPETPLRLLIGALLMSAALL-LRAGARLTLVPTRGVRLSA 141

Query: 143 GTVGGLFGALFGSGGFLYAIYLNS-RLPKDAARATQSALISCSTVVRL--SLFLVAGVYA 199
           G   G    +   GG   A+ L++ ++     RAT  AL+  S VV L  +  + + V+A
Sbjct: 142 GLASGFINGVAAIGGIAIAVLLSTVKMAPATLRATLIALLLFSDVVSLICAALMPSSVHA 201

Query: 200 DLPL-----LMLALCLLPAMALGLWCGRRLTMRMSREAFVRLVTWLVLA 243
              L     L  AL L PAM  G+W G+R    +S E F + V  L++A
Sbjct: 202 SGSLLGPDTLKWALWLAPAMLAGIWWGQRSFKGVSPEQFRKHVLNLLIA 250