Pairwise Alignments

Query, 601 a.a., lipid transporter ATP-binding/permease from Pseudomonas simiae WCS417

Subject, 586 a.a., Efflux ABC transporter, permease/ATP-binding protein from Variovorax sp. SCN45

 Score =  296 bits (759), Expect = 1e-84
 Identities = 208/598 (34%), Positives = 317/598 (53%), Gaps = 28/598 (4%)

Query: 9   SPSSLKIYFRLLSYVRPYAGLFALSILGFLIFASTQPMLGYILKYFVDG-LSNPEAVLFP 67
           SP SL     L  ++RPY     L+ +  ++ A T       L+  +DG   NP+     
Sbjct: 5   SPRSLS---GLSPFLRPYRVQIVLAGVFLVMAAVTTLAFPIALRSLIDGGFVNPDKGA-- 59

Query: 68  SVPFLRDLQLLQAVPLLIILIAAWQGLGSFLGNYLLAKVSLGLVHDLRVQLFNNLLTLPN 127
               LRD        L  + +A   GL S    Y ++ +   +  D+R  ++  +L    
Sbjct: 60  QTMALRD----HFGALFAVAVAL--GLFSAARFYTVSWLGERVTADIRNAVYGRVLKQSP 113

Query: 128 RYFDNHNSGHLISRITFNVTMVTGAATDAIKVVIREGMTVIFLFASLLFMNWRLTLVMIA 187
            +F+   +G ++SR+T + T+V      ++ + +R  +  +   A L++ N  + + ++ 
Sbjct: 114 AFFETTQTGEVLSRLTADTTLVQTVVGSSLSMGLRNAVMGVGALAVLVWTNPYVMVQVLG 173

Query: 188 ILPLIAVMVSTASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEVYEEKRFLKA 247
           IL L+ +      ++ RK S+  Q  + D + +A+E +    VV+S+  E  E  RF  +
Sbjct: 174 ILVLVVLPSMWFGRRVRKLSRASQDRVADSSAIAAEVLNAIPVVQSYTAEGREASRFNGS 233

Query: 248 SQSNTNKQLRMTRTGAIYTPALQLVIYTAMAVLMFLV----LYLRGDASAGDMVAYITLA 303
           +++     +R T+  ++    +  +I T+ A+L  L       LRGD +AG +   +   
Sbjct: 234 TENAFRTAVRRTKARSVLVAFI--IIATSAALLWGLYQGTQAVLRGDITAGHLGQTVVYV 291

Query: 304 GLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDEEVEV---DRGTIERDKVSG---RLDVR 357
            +L      L EV   + +     E + E L     +       +     +G   R D  
Sbjct: 292 AILASATAVLGEVYGDLLRAAGATERLMELLHAPSAIFSPANPAVTPVPAAGSAIRFDAV 351

Query: 358 NLNF-TYPGTERHVLKDISFTAEPGQMIALVGRSGSGKSTLASLIPRFYHHESGEILLDG 416
             ++ + PGT    L+D S    PG+ +ALVG SG+GKST+  L+ R+Y  +SG ++LDG
Sbjct: 352 TFHYPSRPGTP--ALRDFSLDVAPGETVALVGSSGAGKSTVFQLLLRYYDPQSGRLILDG 409

Query: 417 IEIENYKLLNLRKHIAQVTQHVTLFSDTVTNNIAYGDLAGAPRAEVEAAAADANAKDFID 476
             + +  L +LR  I  V Q   +FS +   NI YG    A   EV AAA  A A DF+ 
Sbjct: 410 APLASLALSDLRTRIGLVPQDAVIFSTSAFENIRYGR-PEATAEEVHAAARAAFAHDFLQ 468

Query: 477 QLPKGFDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALD 536
            LP+G+DT +GE GV LSGGQRQR+AIARA+LKN PLL+LDEATSALD ESER +QAAL+
Sbjct: 469 ALPEGYDTFLGERGVRLSGGQRQRIAIARAILKNPPLLLLDEATSALDAESERMVQAALE 528

Query: 537 KVMQGRTTLVIAHRLSTIEKADLILVMDDGRIVERGTHGELLAQNGYYARLHAMGLDA 594
             M+GRTTLVIAHRL+T++KAD I+V+D G IVE+GTH  L+AQ G YARL A+   A
Sbjct: 529 SAMEGRTTLVIAHRLATVQKADRIIVLDHGGIVEQGTHAALVAQGGVYARLAALQFTA 586