Pairwise Alignments

Query, 406 a.a., D-trehalose outer membrane porin (from data) from Pseudomonas simiae WCS417

Subject, 445 a.a., Maltoporin from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  198 bits (504), Expect = 2e-55
 Identities = 142/436 (32%), Positives = 204/436 (46%), Gaps = 62/436 (14%)

Query: 20  AQALEFAGYLRSGAGTSTGSGPQQCFQLPGAQTKYRLGNECEQYAELELRQDLLTLDDGS 79
           A A++F GY RSG G +   G QQCFQ  GAQ+KYRLGNECE YAEL+L Q++    D  
Sbjct: 22  AMAVDFHGYARSGIGWTGSGGEQQCFQTTGAQSKYRLGNECETYAELKLGQEVWKEGD-- 79

Query: 80  VLSVDAMASLYNKYDRALKFQGENNGSARMP---QMYAQWSNLPS-LNGGSLWAGRRYYK 135
                   S Y   + A     +N+  A  P   +   Q  NL   L G ++WAG+R+Y+
Sbjct: 80  -------KSFYFDTNVAYSVAQQNDWEATDPAFREANVQGKNLIEWLPGSTIWAGKRFYQ 132

Query: 136 RNDIHISDFYYWNQSATGGGIEDVLIGDLKYSYAISR-----------KDNLYQKEYATR 184
           R+D+H+ DFYYW+ S  G G+E++ +G  K S A +R            +N+Y     T 
Sbjct: 133 RHDVHMIDFYYWDISGPGAGLENIDVGFGKLSLAATRSSEAGGSSSFASNNIYDYTNETA 192

Query: 185 H---DFNVAGFKTNPGGELELGLSYIEKAGGRD--------TNSGWALTAQHVQKPFLGG 233
           +   D  +A  + NPGG LELG+ Y  +A  RD        +  GW  TA+H Q   L G
Sbjct: 193 NDVFDVRLAQMEINPGGTLELGVDY-GRANLRDNYRLVDGASKDGWLFTAEHTQS-VLKG 250

Query: 234 KNKFALQY----------GEGPGTGLGYTGNTF---LDKSSKSYRAVEFFDWQVTPRFGG 280
            NKF +QY          G   G+G+ +    F   ++ +    R ++     +   +  
Sbjct: 251 FNKFVVQYATDSMTSQGKGLSQGSGVAFDNEKFAYNINNNGHMLRILDHGAISMGDNWDM 310

Query: 281 QIEAVYQKDIRPGSQDQTWMSLGVRPAYAISEQFKLVTELGHDQVDA--TGGTRKLSKFT 338
               +YQ           W ++G+RP Y  +     V E+G+D V++  TG      K T
Sbjct: 311 MYVGMYQDINWDNDNGTKWWTVGIRPMYKWTPIMSTVMEIGYDNVESQRTGDKNNQYKIT 370

Query: 339 FAPTWSPKGPEFWARPEVRLYYTYATW--------NKAAKRAANELAAGSALSDTGSYGT 390
            A  W   G   W+RP +R++ TYA W        N  +K   N   A  A  + GS+G 
Sbjct: 371 LAQQWQ-AGDSIWSRPAIRVFATYAKWDEKWGYDYNGDSKVNPNYGKAVPADFNGGSFGR 429

Query: 391 ARHGS-NVGVQVEYWW 405
                   G Q+E WW
Sbjct: 430 GDSDEWTFGAQMEIWW 445