Pairwise Alignments

Query, 838 a.a., D-trehalose PTS system, I, HPr, and IIA components (from data) from Pseudomonas simiae WCS417

Subject, 833 a.a., putative PTS enzyme: Hpr, enzyme I and II components from Escherichia coli BL21

 Score =  355 bits (911), Expect = e-102
 Identities = 237/686 (34%), Positives = 359/686 (52%), Gaps = 35/686 (5%)

Query: 178 NGLHARPAAVFAQAAKGFNASIYLH--KQTQSANAKSLVAIMALQTVQGDTLQVSAAGED 235
           NG+HARPA+        F++ I  H  +  +  NAKS +A++   T+ GD  Q+  +G D
Sbjct: 13  NGVHARPASHVETLCNTFSSQIEWHNLRTDRKGNAKSALALIGTDTLVGDNCQLLISGAD 72

Query: 236 AEAAIKALVALLAEGCGEAVVNVAE---------PVA-TQSSATLLRGVCASPGSAFGQV 285
            + A + L   L +        +AE         PV+ T  +  ++R      GSA G +
Sbjct: 73  EQEAHQRLSQWLRDEFPHCDAPLAEVKSDELEPLPVSLTNLNPQIIRARTVCSGSAGGIL 132

Query: 286 VQVTDPELVITEQ---GTGGATERAALTRGL--LAANEALQVLQDKAAGSAQAEIFRAHQ 340
             ++  +L          G   E++AL  GL  +  N   ++L    A SA   I  AH+
Sbjct: 133 TPISSLDLNALSNLPAAKGVDAEQSALENGLTLVLKNIEFRLLDSDGATSA---ILEAHR 189

Query: 341 ELLEDPTLLEHAHRLLGEGKSAAFAWNSATLATVTLFQGLGNALIAERAADLADVGQRVL 400
            L  D +L EH    +  G S A A  ++       F    ++ + ERA D+ DV  ++L
Sbjct: 190 SLAGDTSLREHLLAGVSAGLSCAEAIVASANHFCEEFARSSSSYLQERALDVRDVCFQLL 249

Query: 401 KLILGIQ--DSAWDLPERAILIAEQLTPSQTASLDTRKVLGFVTVAGGATSHVAILARAL 458
           + I G Q   +   L + AI +A++LTPSQ   LD   + G +  +GG TSH  ILAR+ 
Sbjct: 250 QQIYGEQRFPAPGKLTQPAICMADELTPSQFLELDKNHLKGLLLKSGGTTSHTVILARSF 309

Query: 459 GLPAICGVPAQVLALANGKQVLLDADKGELHLEPNLAEIEQLEA-ARKHQVLRHQRDVAQ 517
            +P + GV    L     + + +D + G + +EP  A     +  AR    LR Q+ V  
Sbjct: 310 NIPTLVGVDIDALTPWQHQTIYIDGNAGAIVVEPGEAVARYYQQEARVQDALREQQRV-W 368

Query: 518 ASLPATTRDGHHVEVTANVASLQEVEHALTLGGEGVGLLRSEFLYLDRNRAPSPEEQAGT 577
            +  A T DG  +E+ AN+A   E + A   G EGVGL R+E LY+DR  AP   E    
Sbjct: 369 LTQQARTADGIRIEIAANIAHSVEAQAAFGNGAEGVGLFRTEMLYMDRTSAPGESE---L 425

Query: 578 YTAIARALGTE--RNLVVRTLDVGGDKPLAYVPMDAETNPFLGLRGIRLCLERPQLLREQ 635
           Y    +AL +   R+++VRT+D+GGDKP+ Y+ + AE NPFLG R +R+  E   L   Q
Sbjct: 426 YNIFCQALESANGRSIIVRTMDIGGDKPVDYLNIPAEANPFLGYRAVRIYEEYASLFTTQ 485

Query: 636 FRAILASAGFARLHIMLPMVSLLSELHLARKILEEEALALGLTELP-----KLGIMIEVP 690
            R+IL ++    L IM+PM+S + E+   ++ L E    L    +P     +LGIM+EVP
Sbjct: 486 LRSILRASAHGSLKIMIPMISSMEEILWVKEKLAEAKQQLRNEHIPFDEKIQLGIMLEVP 545

Query: 691 SAALMADVFAPHVDFFSIGTNDLTQYTLAMDRDHPRLANQADSFHPAVLRLIATTVKAAH 750
           S   + D     +DFFSIG+NDLTQY LA+DRD+ ++    +S +PA LR +   V+A H
Sbjct: 546 SVMFIIDQCCEEIDFFSIGSNDLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYAVQAVH 605

Query: 751 AHGKWVGVCGALASEALAVPVLIGLGVDELSVSVPLIPTIKATVRELDLADCQIIARQVL 810
             GKW+G+CG L ++   +P+L+GLG+DELS+S P IP  KA + +LD  +C+ +  Q +
Sbjct: 606 RQGKWIGLCGELGAKGSVLPLLVGLGLDELSMSAPSIPAAKARMAQLDSRECRQLLNQAM 665

Query: 811 GLEEAAEVREALRQYHAATVESSPVV 836
               + EV   L Q+   T + +P+V
Sbjct: 666 ACRTSLEVEHLLAQFR-MTQQDAPLV 690