Pairwise Alignments

Query, 618 a.a., polymerase from Pseudomonas simiae WCS417

Subject, 391 a.a., O-antigen polymerase from Pseudomonas putida KT2440

 Score =  103 bits (257), Expect = 1e-26
 Identities = 85/365 (23%), Positives = 164/365 (44%), Gaps = 11/365 (3%)

Query: 22  LPIGLLLLLSSLFFVSNRNVLHRIVYILFSVPTLFMLCMRPRELKELLREPLAL--AFLA 79
           L +GL+  L+++    +  V  + + +   +PTL +       L +  R   AL  + L 
Sbjct: 12  LGLGLVWFLAAIALAPSNKVYQQGLVLFLWLPTLVLAWSARGVLVQAWRRQPALWGSVLL 71

Query: 80  FSAWALASLMWSPEPTTDTDLFKRPLNTFMLFGGCGLLLHYRNELFKPIFFSAAVIALVV 139
             AW+  SL WSP      +L KR L   +      LL        + +    + +  + 
Sbjct: 72  LLAWSGLSLAWSPAEEPMREL-KRLLYILVFLLAFPLLAQLGQARIRQLLLLGSALLAIA 130

Query: 140 SLCNLVAFVKGFE--PGMRMIGGRGALDNPLLSSHLFGFFCVYWLYVCMTTQRLNVLWFS 197
           +L +++ F  G +  P +  + G G + +P+L +++ G   +  LY     + L +LW +
Sbjct: 131 ALVSIIKFY-GVQRAPLLFRLAGIGEISHPILGAYVIGSALLLMLYEPPRRRGLQLLWLA 189

Query: 198 APALAVMLAAVLATGSRTPLVALTLTILWMTFVSRNRRSALL-IAGMILGGVGLLLLYPE 256
           A  LA + A  + + SR  ++AL +T++      R+R S +  +  ++  G+  L +Y +
Sbjct: 190 A--LACLGAFAMLSQSRGAVLALVITVVMAPLWFRDRHSRVFSVLALLATGLAFLAVY-D 246

Query: 257 QITTRGSSFRFELWGMSLQRIAEHPWIGHSYDSELYLTLSDGYELREPHSFALGVLYYVG 316
            I  RGSS+R E++   +Q IA HPW G    ++ Y   + G      H+    V   +G
Sbjct: 247 VIAQRGSSYRPEIFHAVVQMIAAHPWTGLGLGAD-YEVSAVGMHFDHTHNMFTHVAVEMG 305

Query: 317 IIGFIPWIFMLGWGLYKGLKERAQPLFILASSLLAYGIGAGLTEGGGILSRPKEHWFLLW 376
           + G + W+ +  + L + ++ R      +      Y   A   +   +   P+  WF+ W
Sbjct: 306 LPGMLLWVMVWLFTLGEIVRARGTLFGKVLLGFWVYSTLAMQFDAASLTGTPRAEWFISW 365

Query: 377 IPLAI 381
           +P+ +
Sbjct: 366 LPVGL 370