Pairwise Alignments

Query, 486 a.a., murein transglycosylase from Pseudomonas simiae WCS417

Subject, 254 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 17/229 (7%)

Query: 44  RVVTRNSPATY----FQDRNGE-TGFEYELVKRFADDLGVKLEIETADNLDDLFGQLGKP 98
           R +T  S ATY    F++++ +  GF+ +++   A   G+K++I        +FG L   
Sbjct: 28  RELTVASSATYAPFAFENKDKQIVGFDIDIINAIAKQQGLKIKIVNTP-FTGIFGALN-- 84

Query: 99  NGPV-LAAAGLVSSEQRQTQVRFSHPYLEVTPQIIYRNGQSRPTNAADLVGKKIMVLKGS 157
           NG V L  +G+  +++R+    F+ PY     Q+I     S+ T+  DL GKKI V+  S
Sbjct: 85  NGDVDLVISGVTINDKRKQSYDFTPPYFAAR-QLIALPKNSKVTSLKDLAGKKIAVVSAS 143

Query: 158 THAEQLA--ELKKQNPAIEYEESDAVEVVDLLRMVDEGQIDLTLVDSNEVAMNQVYFPNV 215
           T A+ +A  E  K +P I   ES  + + +L      G +D  + D+  +A      P++
Sbjct: 144 T-ADDIASREFGKTSPDIRRFESTPLIISELA----GGGVDAAMGDNGVIAYRVAQNPDL 198

Query: 216 RVAFDLGNASNQSWAVAAGEDNSLLNEINSYLDKVEKNGTLQRLKDRYY 264
           +   D          V    D +LL+++ + L  +  +G+   +  +++
Sbjct: 199 KTIDDKSFPEEGFGIVVKKGDKALLDKLTAGLAAIRADGSYVTIYKKWF 247