Pairwise Alignments

Query, 568 a.a., PTS N-acetyl-D-glucosamine transporter from Pseudomonas simiae WCS417

Subject, 513 a.a., PTS system, glucose-specific IIC component (EC 2.7.1.69) / PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIA component (EC 2.7.1.69) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  336 bits (862), Expect = 1e-96
 Identities = 200/499 (40%), Positives = 290/499 (58%), Gaps = 50/499 (10%)

Query: 4   HFIEGLQRLGRALMLPIAILPIAGLLLR----------------LGDTDLLNIA-VMHDA 46
           + ++ LQ +GR+LM+PIA+LP AG+LL                 LG   L+++  +M +A
Sbjct: 5   NLLQMLQSIGRSLMIPIAMLPAAGILLAFGVSFQDPNIVASLPFLGTDGLVHVLKLMAEA 64

Query: 47  GQAIFANLALIFAIGIAVGFARDNNGTAGLAGAIGYLVMVSTL------------KVMD- 93
           G AIFANL L+FA+G+AVG + D+ G AGL+   G+L+M  T+            +V D 
Sbjct: 65  GSAIFANLPLLFAVGVAVGLS-DDQGIAGLSAIAGFLIMNVTIGQFLGITPESVAQVRDY 123

Query: 94  ------TSINMGMLAGIASGLMAGGLYNRFKDIKLPEYLAFFGGRRFVPIVTGFSAVGLG 147
                  S+  G+  GI  G++A  LY R+  I+LP +L FF G+RFVPIVT F+A+ +G
Sbjct: 124 TMVLGIPSLQTGVFGGIIIGIIAAWLYKRYYRIQLPSWLEFFSGKRFVPIVTSFAALFVG 183

Query: 148 VIFGLIWPPIQHGINSFG-VLLMESGSLGAFVFGVFNRLLIVTGLHHILNNMAWFVFGSF 206
           ++  ++WPP+QH IN     + ++   + AF+FG   RLLI  GL+H+     W  FG +
Sbjct: 184 LVMAVVWPPVQHLINGLSNTMTVQGPGVSAFLFGFVERLLIPFGLNHVWWPTFWLQFGEY 243

Query: 207 TDPVTGAVVTGDLTRYFAG-----DPKGGQFMTGMFPVMLFGLPAACLAMYRNALPERRK 261
            +   G VV GD   +FA          G FM G+ P+ +F +PA  LA+YR A PE   
Sbjct: 244 VNKA-GQVVHGDQLIFFAQLKDQVPITAGTFMAGLTPIKMFCIPAIALAIYRCASPENIA 302

Query: 262 VMGGIFLSMALTSFLTGVTEPIEFAFMFLAPFLYLIHAVLTGLSMAVTNMLNIHLGFTFS 321
            + GI LS A+TS + G+TEPIEF+F+F+AP LY IHAVL GL   +    ++H+G +FS
Sbjct: 303 RVKGIMLSGAITSIVCGITEPIEFSFLFVAPVLYGIHAVLAGLVFLLMEWFSVHIGLSFS 362

Query: 322 GGFIDMVLGWG---KSTNGWLVFPVGLAYALIYYSVFNYCIRHFNLKTPGREDTQVVQAE 378
           GG ID  L +G   ++ + ++VFPVGL    +YY +F + IR +NL TPGRE  +   A+
Sbjct: 363 GGLID-YLFFGVLPRAPHWYMVFPVGLVMGAVYYVLFTFAIRRWNLLTPGREVEETAVAQ 421

Query: 379 AMSDNQRATAYIQALGGAQNLLSVGACTTRLRLDMVDRNKAVDAELKALGAMAVVRPGNG 438
               N   +  I A GG  N+ S+ AC +RLR+D+ D+     A LK LGA  VV  GN 
Sbjct: 422 ESEQNDLVSGIILAYGGLGNMTSIEACMSRLRIDVTDKTLVDKALLKQLGAAGVVEVGN- 480

Query: 439 GSLQVVVGPMADSIADEIR 457
            ++Q V G  +D + + IR
Sbjct: 481 -NIQSVFGMKSDRLKEAIR 498



 Score = 36.6 bits (83), Expect = 2e-06
 Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 491 ALGGRGNVRQLEAVAMTRLRVELGDDSGLSEADLTALGCQGVSQLESGVWHLLIGDKATG 550
           A GG GN+  +EA  M+RLR+++ D + + +A L  LG  GV ++ + +   + G K+  
Sbjct: 435 AYGGLGNMTSIEA-CMSRLRIDVTDKTLVDKALLKQLGAAGVVEVGNNI-QSVFGMKSDR 492

Query: 551 LGEALERL 558
           L EA+  +
Sbjct: 493 LKEAIRAI 500