Pairwise Alignments

Query, 568 a.a., PTS N-acetyl-D-glucosamine transporter from Pseudomonas simiae WCS417

Subject, 519 a.a., PTS system, glucose-like IIB component from Enterobacter asburiae PDN3

 Score =  344 bits (883), Expect = 4e-99
 Identities = 202/504 (40%), Positives = 282/504 (55%), Gaps = 54/504 (10%)

Query: 5   FIEGLQRLGRALMLPIAILPIAGLLLRLG---------------DTDLLN--IAVMHDAG 47
           + E  QR G++ MLPIA+LP AGLLL +G               D   L     +M  AG
Sbjct: 13  WFEKAQRFGKSFMLPIAVLPAAGLLLGIGGALSNPNTLAAYPFLDVGWLQAIFTIMSSAG 72

Query: 48  QAIFANLALIFAIGIAVGFARDNNGTAGLAGAIGYLVMVSTLKVM--------------- 92
             +FANL+++FA+G+AVG A+ + GTAGLA  + +LVM +T+  +               
Sbjct: 73  SIVFANLSVLFAVGVAVGLAKSDKGTAGLAALLAFLVMNATINALLILTGKLAHENPGAV 132

Query: 93  -------DTSINMGMLAGIASGLMAGGLYNRFKDIKLPEYLAFFGGRRFVPIVTGFSAVG 145
                    ++  G+  G+  GL+   L++ F  I LP++L FFGG RFVPI++  +A+ 
Sbjct: 133 GQGITLGIQTLETGVFGGVVIGLVTCTLHHWFNKIALPQFLGFFGGSRFVPIISSLAAIL 192

Query: 146 LGVIFGLIWPPIQHGINSFGVLLMESGSLGAFVFGVFNRLLIVTGLHHILNNMAWFVFGS 205
           +G +  ++WP  Q  I   G L+  +G LG  ++G   R+L   GLHHI     W     
Sbjct: 193 VGALMTVVWPHFQKLIFGLGGLVDATGYLGTLLYGFILRMLGPFGLHHIFYLPFWTTALG 252

Query: 206 FTDPVTGAVVTGDLTRYFA--GDPKG-------GQFMTGMFPVMLFGLPAACLAMYRNAL 256
            ++ V G +V G    +FA   DP          +FM+G F  M+FGL  ACLAMY  A 
Sbjct: 253 GSEIVNGHLVEGTQRIFFAQLADPNTQHFYEGTSRFMSGRFITMMFGLLGACLAMYHTAK 312

Query: 257 PERRKVMGGIFLSMALTSFLTGVTEPIEFAFMFLAPFLYLIHAVLTGLSMAVTNMLNIHL 316
           PE +K + G+ LS ALTSFLTG+TEPIEF+F+F+AP LY+IHA+  GL+  + +ML+I +
Sbjct: 313 PENKKRVAGLLLSAALTSFLTGITEPIEFSFLFIAPVLYVIHALFDGLAFMLAHMLHITI 372

Query: 317 GFTFSGGFIDMVLG---WGKSTNGWLVFP-VGLAYALIYYSVFNYCIRHFNLKTPGREDT 372
           G TFSGGFID VL     G+S   W+  P VG+ +  +YY  F Y I  F+  TPGRE  
Sbjct: 373 GQTFSGGFIDFVLFGILQGESKTNWMFVPLVGVPWFFLYYFTFRYLINRFDFATPGREKE 432

Query: 373 QVVQAEAMSDNQRATAYIQALGGAQNLLSVGACTTRLRLDMVDRNKAVDAELKALGAMAV 432
            +      S ++RA A I  LGG +NL  V  C TRLR+ + D +K  DA LKA GA  V
Sbjct: 433 AMANEVTFSQSERAVAVIAGLGGKENLEEVDCCATRLRVTVKDGSKVNDAALKATGARGV 492

Query: 433 VRPGNGGSLQVVVGPMADSIADEI 456
           +  GNG  +QV+ GP    I +E+
Sbjct: 493 IVRGNG--VQVIYGPHVTIIKNEV 514



 Score = 36.6 bits (83), Expect = 3e-06
 Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 10/94 (10%)

Query: 466 AAPVVVAPVEKPVAVNVQEAEKWLNALGGRGNVRQLEAVAMTRLRVELGDDSGLSEADLT 525
           A  V  +  E+ VAV        +  LGG+ N+ +++  A TRLRV + D S +++A L 
Sbjct: 435 ANEVTFSQSERAVAV--------IAGLGGKENLEEVDCCA-TRLRVTVKDGSKVNDAALK 485

Query: 526 ALGCQGVSQLESGVWHLLIGDKATGLGEALERLV 559
           A G +GV    +GV  ++ G   T +   +E ++
Sbjct: 486 ATGARGVIVRGNGV-QVIYGPHVTIIKNEVEEIL 518