Pairwise Alignments

Query, 568 a.a., PTS N-acetyl-D-glucosamine transporter from Pseudomonas simiae WCS417

Subject, 659 a.a., PTS system, N-acetylglucosamine-specific IIBC component from Enterobacter asburiae PDN3

 Score =  325 bits (833), Expect = 3e-93
 Identities = 195/506 (38%), Positives = 283/506 (55%), Gaps = 45/506 (8%)

Query: 17  MLPIAILPIAGLLLRLG---------DTDLLNIAVMHDAGQAIFANLALIFAIGIAVGFA 67
           M+P+A LP A +L+ +G         +T  L  A    +G AI  N++++FAIG+A G +
Sbjct: 1   MVPVATLPAAAILMGVGYWIDPNGWGNTSAL-AAFFIKSGSAIIDNMSVLFAIGVAYGMS 59

Query: 68  RDNNGTAGLAGAIGYLV-----------MVSTLKVMDTSINMGMLA----GIASGLMAGG 112
           +D +G A L G +G+LV           M+  +         G ++    GI  G+++  
Sbjct: 60  KDKDGAAALTGFVGFLVLTTLCSPAAVAMIQKIPADQVPAAFGKISNQFVGILVGIISAE 119

Query: 113 LYNRFKDIKLPEYLAFFGGRRFVPIVTGFSAVGLGVIFGLIWPPIQHGINSFGVLLMESG 172
           LYNRF  ++LP+ L+FF GRR VPI+T F  + +  I   +WP I  G+ +FG  + + G
Sbjct: 120 LYNRFSSVELPKALSFFSGRRLVPILTSFVMIVVAFIMMYVWPMIFDGLVNFGEHIQKLG 179

Query: 173 SLGAFVFGVFNRLLIVTGLHHILNNMAWFVFGSFTD--PVTGAVVTGDLTRYFAGDPKGG 230
           S+GA V+  FNRLLI  GLHH LN++ WF      D     G   + +  +   G    G
Sbjct: 180 SVGAGVYAFFNRLLIPVGLHHALNSVFWFDVAGINDIPNFLGGAQSIEAGKAVVGIT--G 237

Query: 231 QFMTGMFPVMLFGLPAACLAMYRNALPERRKVMGGIFLSMALTSFLTGVTEPIEFAFMFL 290
           ++  G FP+M+FGLP A LA+Y  A PE +  + GI ++ A  +F TG+TEP+EF+FMF+
Sbjct: 238 RYQAGFFPIMMFGLPGAALAIYHCARPENKAKVLGIMMAGAFAAFFTGITEPLEFSFMFV 297

Query: 291 APFLYLIHAVLTGLSMAVTNMLNIHLGFTFSGGFIDMVLGWGK--STNGWLVFPVGLAYA 348
           AP LY+IHAVLTG+S+ +   ++   GF FS G +DMVL      +T+ W++ P GL + 
Sbjct: 298 APVLYVIHAVLTGISVFIAASMHWIAGFGFSAGLVDMVLSSRNPLATHWWMLIPQGLVFF 357

Query: 349 LIYYSVFNYCIRHFNLKTPGRE-----------DTQVVQAEAMSDNQRATAYIQALGGAQ 397
            IYY VF + I  FNL TPGRE           D  V  A+    +  A  YI A+GG+ 
Sbjct: 358 AIYYMVFRFTITKFNLMTPGRELAVAGSEADGQDVNVSGAQDQDVSGLARQYIAAVGGSD 417

Query: 398 NLLSVGACTTRLRLDMVDRNKAVDAELKALGAMAVVRPGNGGSLQVVVGPMADSIADEIR 457
           NL  + AC TRLRL++ D +   +A  K LGA  V+R  N  S+Q++VG +A+ IA+ ++
Sbjct: 418 NLTGIDACITRLRLNVKDSSLVNEALAKRLGASGVIRL-NKTSVQIIVGFVAEKIANAMK 476

Query: 458 LAMPGFVAAAPVVVAPVEKPVAVNVQ 483
              P  VAAA    AP   P A   Q
Sbjct: 477 TTGP--VAAAEASAAPAAAPAAAKPQ 500



 Score = 37.7 bits (86), Expect = 1e-06
 Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 1/72 (1%)

Query: 485 AEKWLNALGGRGNVRQLEAVAMTRLRVELGDDSGLSEADLTALGCQGVSQLESGVWHLLI 544
           A +++ A+GG  N+  ++A  +TRLR+ + D S ++EA    LG  GV +L      +++
Sbjct: 406 ARQYIAAVGGSDNLTGIDA-CITRLRLNVKDSSLVNEALAKRLGASGVIRLNKTSVQIIV 464

Query: 545 GDKATGLGEALE 556
           G  A  +  A++
Sbjct: 465 GFVAEKIANAMK 476