Pairwise Alignments

Query, 568 a.a., PTS N-acetyl-D-glucosamine transporter from Pseudomonas simiae WCS417

Subject, 477 a.a., PTS glucose transporter subunit IIBC from Escherichia coli ECRC100

 Score =  369 bits (946), Expect = e-106
 Identities = 201/476 (42%), Positives = 297/476 (62%), Gaps = 26/476 (5%)

Query: 1   MYQHFIEGLQRLGRALMLPIAILPIAGLLLRLGDTDLLNIA-----VMHDAGQAIFANLA 55
           M+++    LQ++G++LMLP+++LPIAG+LL +G  +   +      VM +AG ++FAN+ 
Sbjct: 1   MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMP 60

Query: 56  LIFAIGIAVGFARDNNGTAGLAGAIGYLVMVSTLKVMDTSI--------------NMGML 101
           LIFAIG+A+GF  +N+G + LA  + Y +MV T+ V+   +              + G+L
Sbjct: 61  LIFAIGVALGFT-NNDGVSALAAVVAYGIMVKTMAVVAPLVLHLPAEEIASKHLADTGVL 119

Query: 102 AGIASGLMAGGLYNRFKDIKLPEYLAFFGGRRFVPIVTGFSAVGLGVIFGLIWPPIQHGI 161
            GI SG +A  ++NRF  IKLPEYL FF G+RFVPI++G +A+  GV+   IWPPI   I
Sbjct: 120 GGIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLAAIFTGVVLSFIWPPIGSAI 179

Query: 162 NSFGVLLMESGSLGAF-VFGVFNRLLIVTGLHHILNNMAWFVFGSFTDPVTGAVVTGDLT 220
            +F         + AF ++G   R L+  GLHHI N       G +T+   G V  GD+ 
Sbjct: 180 QTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPFQMQIGEYTN-AAGQVFHGDIP 238

Query: 221 RYFAGDPKGGQFMTGMFPVMLFGLPAACLAMYRNALPERRKVMGGIFLSMALTSFLTGVT 280
           RY AGDP  G+ ++G F   ++GLPAA +A++ +A PE R  +GGI +S ALTSFLTG+T
Sbjct: 239 RYMAGDPTAGK-LSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGIT 297

Query: 281 EPIEFAFMFLAPFLYLIHAVLTGLSMAVTNMLNIHLGFTFSGGFIDMVLGWGKSTNGWLV 340
           EPIEF+FMF+AP LY+IHA+L GL+  +  +L +  G +FS G ID ++  G S+  WL 
Sbjct: 298 EPIEFSFMFVAPILYIIHAILAGLAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKLWLF 357

Query: 341 FPVGLAYALIYYSVFNYCIRHFNLKTPGREDTQVVQAEAMSDNQRATAYIQALGGAQNLL 400
             VG+ YA++YY++F   I+  +LKTPGRED     A+A   ++ A A + A GG +N+ 
Sbjct: 358 PIVGIGYAIVYYTIFRVLIKALDLKTPGREDA-TEDAKATGTSEMAPALVAAFGGKENIT 416

Query: 401 SVGACTTRLRLDMVDRNKAVDAELKALGAMAVVRPGNGGSLQVVVGPMADSIADEI 456
           ++ AC TRLR+ + D +K   A LK LGA  VV  G+G  +Q + G  +D++  E+
Sbjct: 417 NLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSG--VQAIFGTKSDNLKTEM 470



 Score = 39.7 bits (91), Expect = 3e-07
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 2/69 (2%)

Query: 491 ALGGRGNVRQLEAVAMTRLRVELGDDSGLSEADLTALGCQGVSQLESGVWHLLIGDKATG 550
           A GG+ N+  L+A  +TRLRV + D S + +A L  LG  GV    SGV   + G K+  
Sbjct: 408 AFGGKENITNLDA-CITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGV-QAIFGTKSDN 465

Query: 551 LGEALERLV 559
           L   ++  +
Sbjct: 466 LKTEMDEYI 474