Pairwise Alignments

Query, 568 a.a., PTS N-acetyl-D-glucosamine transporter from Pseudomonas simiae WCS417

Subject, 477 a.a., PTS glucose transporter subunit IIBC from Dickeya dianthicola ME23

 Score =  362 bits (928), Expect = e-104
 Identities = 201/476 (42%), Positives = 297/476 (62%), Gaps = 26/476 (5%)

Query: 1   MYQHFIEGLQRLGRALMLPIAILPIAGLLLRLGDTDLLNI-----AVMHDAGQAIFANLA 55
           M+++    LQ++G++LMLP+++LPIAG+LL +G  +   +     +VM  AG ++FAN+ 
Sbjct: 1   MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSSVMAQAGDSVFANMP 60

Query: 56  LIFAIGIAVGFARDNNGTAGLAGAIGYLVMVSTLKVM----------DTSIN----MGML 101
           LIFAIG+A+GF  +N+G + LA  + Y +MV T+ V+          D + N     G+L
Sbjct: 61  LIFAIGVALGFT-NNDGVSALAAVVAYGIMVKTMAVVAPLVLHMSPADIAANHMADTGVL 119

Query: 102 AGIASGLMAGGLYNRFKDIKLPEYLAFFGGRRFVPIVTGFSAVGLGVIFGLIWPPIQHGI 161
            GI +G +A  ++NRF  I+LPEYL FF G+RFVPI++G +A+  GV    IWPP+   I
Sbjct: 120 GGIIAGAIAAYMFNRFYRIRLPEYLGFFAGKRFVPIISGLAAIITGVALSFIWPPVGSAI 179

Query: 162 NSFGVLLMESGSLGAF-VFGVFNRLLIVTGLHHILNNMAWFVFGSFTDPVTGAVVTGDLT 220
            +F         + AF ++G+  R L+  GLHHI N       G FT+   G V  GD+ 
Sbjct: 180 QAFSRWAAYQNPVLAFGIYGIVERSLVPFGLHHIWNVPFQMQVGEFTN-AAGQVFHGDIP 238

Query: 221 RYFAGDPKGGQFMTGMFPVMLFGLPAACLAMYRNALPERRKVMGGIFLSMALTSFLTGVT 280
           RY AGDP  G+ ++G F   ++GLPAA LA++ +A PE R  +GGI +S ALT+FLTG+T
Sbjct: 239 RYMAGDPTAGK-LSGGFLFKMYGLPAAALAIWHSAKPENRAKVGGIMISAALTAFLTGIT 297

Query: 281 EPIEFAFMFLAPFLYLIHAVLTGLSMAVTNMLNIHLGFTFSGGFIDMVLGWGKSTNGWLV 340
           EPIEF+F+F+AP LY+IHAVL GL+  +  +L +  G +FS G ID V+  G  +  WL 
Sbjct: 298 EPIEFSFIFVAPILYVIHAVLAGLAFPICILLGMRDGTSFSHGLIDFVVLSGNGSKLWLF 357

Query: 341 FPVGLAYALIYYSVFNYCIRHFNLKTPGREDTQVVQAEAMSDNQRATAYIQALGGAQNLL 400
             VGL YA +YY+VF   I   +LKTPGRE++ V +  A   ++ A + + A GG +N+ 
Sbjct: 358 PIVGLCYAAVYYTVFRVLIAKLDLKTPGREES-VSEQSAQGSSEMAASLVSAFGGKENIT 416

Query: 401 SVGACTTRLRLDMVDRNKAVDAELKALGAMAVVRPGNGGSLQVVVGPMADSIADEI 456
           ++ AC TRLR+ + D +K   AELK LGA  VV  G+G  +Q + G  +D++  ++
Sbjct: 417 NLDACITRLRVSVGDVSKVDQAELKKLGAAGVVVAGSG--VQAIFGTKSDNLKTDM 470



 Score = 43.5 bits (101), Expect = 2e-08
 Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 485 AEKWLNALGGRGNVRQLEAVAMTRLRVELGDDSGLSEADLTALGCQGVSQLESGVWHLLI 544
           A   ++A GG+ N+  L+A  +TRLRV +GD S + +A+L  LG  GV    SGV   + 
Sbjct: 402 AASLVSAFGGKENITNLDA-CITRLRVSVGDVSKVDQAELKKLGAAGVVVAGSGV-QAIF 459

Query: 545 GDKATGL 551
           G K+  L
Sbjct: 460 GTKSDNL 466