Pairwise Alignments

Query, 270 a.a., cytochrome C assembly protein from Pseudomonas simiae WCS417

Subject, 271 a.a., Inner membrane protein YpjD from Variovorax sp. SCN45

 Score =  114 bits (285), Expect = 2e-30
 Identities = 94/271 (34%), Positives = 130/271 (47%), Gaps = 20/271 (7%)

Query: 9   LPSLAAAILYAAATLYQGTRLAQGAKADKRLLVGLGVLALLAHAASLFTHLMTPVGLGLD 68
           +PS     L  A  +  G   A GA+  ++       +A L HA +L   L   +G    
Sbjct: 5   IPSPLGVALGIATAVAYGFVAAAGARMSRQATQWALGIAWLLHALALAHGL---IGSEPR 61

Query: 69  FFSAASLIAAAVIALTLLACYRIPVENLLV--LLFPLGMLTVLMAQFAPTGTVQVIDEEP 126
           F  A +L   A + LT+ A        L V   L  LG   VL+A     G+   +   P
Sbjct: 62  FGFAPALSVTAWLVLTVYAVESRMYPQLKVRRALAWLGAAAVLLAILF-AGSPLHVSASP 120

Query: 127 GILAHILLSILAYGMFTIAVFQALLLLLQDHQLK----HKHPSGLIKNFPPLQTMESLLF 182
            +  H+ L I +YG+F  AV  A L+   + Q++      H  G+     PL T+E L F
Sbjct: 121 WLPLHLALGIASYGLFGAAVVHAWLITRAEKQIRLATAEPHQGGV-----PLLTLERLTF 175

Query: 183 GFLWAGWTLLSLSLISGWLFVENLFAQ-----HLVHKTLLACLAWVVFSVLLWGRNRLGW 237
            F+ AG+ LLS +L++G LF E L+          HKT  + LAW+ F+VLL GR R GW
Sbjct: 176 RFVTAGFVLLSATLLAGLLFSEQLYGTAGRFWKWDHKTTFSVLAWLTFAVLLIGRARFGW 235

Query: 238 RGHKAIRWTLAGFCLLMLAYFGSKLVREYIL 268
           RG  A R   AG  LL+LAY GS+ V E +L
Sbjct: 236 RGRTARRVLYAGSALLLLAYVGSRFVLEVVL 266