Pairwise Alignments

Query, 458 a.a., RNA-binding protein from Pseudomonas simiae WCS417

Subject, 321 a.a., signal recognition particle-docking protein FtsY from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  138 bits (347), Expect = 3e-37
 Identities = 98/295 (33%), Positives = 153/295 (51%), Gaps = 23/295 (7%)

Query: 3   ENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVNSVKERAVGT 62
           ENL  +L +    V GK+K+ +D + D L E+   L+ +DV +      +  ++ER    
Sbjct: 26  ENLFSKLGKA---VIGKSKV-DDEVLDELEEI---LITSDVGVDTTIKVIQRIEERVARD 78

Query: 63  EVSRSLTPGQAFVKIVQAELESLMGAANE-DLNLSAVP----PAVVLMAGLQGAGKTTTA 117
           +   +        KI++ E+  L+  +NE DL+   +P    P V+++ G+ G GKTTT 
Sbjct: 79  KYVNTTE----LDKILRQEIVGLLEESNEVDLSNFELPKDKKPYVIMVVGVNGVGKTTTI 134

Query: 118 GKLARFLKERKKKSVMVVSADVYRPAAIKQLEMLAGEVGVTFFPSDLSQKPVDIANAAIK 177
           GKLA   K   K SV++ +AD +R AA+ QL +    V V      ++  P  +A   +K
Sbjct: 135 GKLAHQFKNAGK-SVVLGAADTFRAAAVDQLILWGERVDVPVVSHGMNADPASVAFDTVK 193

Query: 178 EAKLKFIDVVIVDTAGRLHIDEEMMGEIKALHAAIN------PVETLFVVDAMTGQDAAN 231
           +      DVVIVDTAGRLH    +M E+  +   +       P E L V+D  TGQ+A  
Sbjct: 194 KGVDMGADVVIVDTAGRLHTKVNLMNELSKIKRVMQKFIDDAPHEILLVLDGSTGQNAFI 253

Query: 232 TAKAFGDALPLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEKSDALEPFH 286
            AK F  A  +  + +TK+DG A+GG  + +      P+K+IG+GEK   L+ F+
Sbjct: 254 QAKEFTKATEINALAITKLDGTAKGGVVIGISDQFKIPVKYIGVGEKVTDLQIFN 308