Pairwise Alignments

Query, 178 a.a., 16S rRNA processing protein RimM from Pseudomonas simiae WCS417

Subject, 164 a.a., 16S rRNA processing protein RimM from Sphingobium sp. HT1-2

 Score = 68.9 bits (167), Expect = 4e-17
 Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 4/134 (2%)

Query: 7   VADDLIVIGKIYSVHGVRGEVKVYSFTDPTENLLQYKTWTLKREGSVKQVELVSGRGSDK 66
           + D  + +  I   HGV GEV++  F +  E L  YK++    + + + + L S R    
Sbjct: 1   LTDKPVTLAAIIGAHGVAGEVRLKLFGEGAEALKSYKSF----DAAGRTLTLKSVRPGPN 56

Query: 67  FLVAKLKGLDDREEARLLAGYEICVPRNLFPELTDGEYYWYQLEGLKVIDQLGQLFGKID 126
             VA+   + DR  A  L G  + VPR+  P L++GEYY   L GL      G+  G+I 
Sbjct: 57  GAVARFAEIGDRGAAEALRGTALTVPRSALPALSEGEYYHADLVGLPCTSSTGETLGEII 116

Query: 127 HLLETGANDVMVVK 140
            +   GA D++ V+
Sbjct: 117 AVENFGAGDIIEVQ 130