Pairwise Alignments

Query, 298 a.a., tyrosine recombinase XerD from Pseudomonas simiae WCS417

Subject, 333 a.a., Tyrosine recombinase XerC from Xanthobacter sp. DMC5

 Score =  136 bits (343), Expect = 6e-37
 Identities = 102/302 (33%), Positives = 149/302 (49%), Gaps = 16/302 (5%)

Query: 8   LIDRFLDALWLEKGLSDNTRQAYRSDLALFNGWLQE---KNLELVNAGRELILDH---LA 61
           +++ +L  L  E+ LS  T +AY  DL++    L +   K   L +       D    LA
Sbjct: 27  VVEGWLARLAHERRLSAKTLEAYARDLSVVLVRLTDHLGKRPTLPDLAALTPADVRAVLA 86

Query: 62  WRLEQNYKPRSTARFLSGVRGFYRYLLREKLIAVDPTLQVDMPQLGRPLPKSLSEADVEA 121
            R  +   PR+  R L+  R F R+L RE    V     V  P++ + LPK +S A   A
Sbjct: 87  SRRAEGVAPRTLVRLLAAARSFGRHLEREGQGKVGALTAVRAPKVPKGLPKPVSVAAARA 146

Query: 122 LLAAPDLSEAIGQ------RDRAMLEVLYACGLRVTELISLTLEQVNLRQGVLRVMGKGS 175
           L A PD      +      RD A++ +LY  GLR++E + LT   ++     + V GKG+
Sbjct: 147 L-ADPDTRAGEAREAWVLARDAAVIGLLYGAGLRISEALGLTAGMLSSGTTQITVTGKGN 205

Query: 176 KERLVPMGEEAIVWVERYMRDARSELLGGRPSDVLFPSLRGEQMTRQTFWHRIKHQAKVA 235
           K R+VP+    +  VE Y       L   +P   LF   +G  ++ +     ++      
Sbjct: 206 KTRMVPLIAPVLAAVEAYRGLCPYPLAPDKP---LFRGAKGGPLSPRIVQLAVERMRGAL 262

Query: 236 GIGKALSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDMHAKHH 295
           G+  + +PH LRH+FATHLL+ G DLR +Q LLGH+ LSTTQIYT V  A L +     H
Sbjct: 263 GLPDSATPHALRHSFATHLLSRGGDLRAIQELLGHASLSTTQIYTQVDAAALMNAWRAAH 322

Query: 296 PR 297
           PR
Sbjct: 323 PR 324