Pairwise Alignments

Query, 298 a.a., tyrosine recombinase XerD from Pseudomonas simiae WCS417

Subject, 299 a.a., Tyrosine recombinase XerC from Pseudomonas putida KT2440

 Score =  168 bits (426), Expect = 1e-46
 Identities = 110/285 (38%), Positives = 165/285 (57%), Gaps = 15/285 (5%)

Query: 19  EKGLSDNTRQAYRSDLALFNGWLQEKNLELVNAGRELILDHLAWRLEQN-YKPRSTARFL 77
           E+ +S++T Q YR DL     + +E  +    A +   L  L  RL  +   PRS AR L
Sbjct: 15  ERQVSEHTSQGYRRDLEKVIAYCEEHGIADWQALQIQQLRQLIARLHHHGQSPRSLARLL 74

Query: 78  SGVRGFYRYLLREKLIAVDPTLQVDMPQLGRPLPKSLSEADVEALLAAPDLSEAIGQRDR 137
           S VRG YRYL RE L   DP   +  P+  R LPK L       LL      + I +RD+
Sbjct: 75  SAVRGLYRYLNREGLCQHDPANGLSAPKGERRLPKVLDTDRALQLLDGGVDDDFIARRDQ 134

Query: 138 AMLEVLYACGLRVTELISLTLEQVNLRQGVLRVMGKGSKERLVPMGEEAIVWVERYMRDA 197
           A+LE+ Y+ GLR++EL +L L+ ++L  G+++V+GKG K R++P+G +A   ++ + R  
Sbjct: 135 AILELFYSSGLRLSELTNLDLDHLDLAAGLVQVLGKGGKARVLPVGRKAREALQAWYR-- 192

Query: 198 RSELLG-GRPSD-VLFPSLRGEQMTRQTFWHRIKHQAKVAG---IGKALSPHTLRHAFAT 252
              L G G P D  +F + +G +++ +     ++ + KVAG   +G+ L PH LRH+FA+
Sbjct: 193 ---LRGIGNPRDRAVFITRQGNRISPRA----VRLRVKVAGERELGQHLHPHMLRHSFAS 245

Query: 253 HLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDMHAKHHPR 297
           H+L    DLR VQ +LGH+D+STTQIYTH+    L  ++   HPR
Sbjct: 246 HVLESSQDLRAVQEMLGHADISTTQIYTHLDFQHLAAVYDSAHPR 290