Pairwise Alignments

Query, 298 a.a., tyrosine recombinase XerD from Pseudomonas simiae WCS417

Subject, 581 a.a., site-specific tyrosine recombinase XerC from Dickeya dianthicola ME23

 Score =  162 bits (410), Expect = 2e-44
 Identities = 105/293 (35%), Positives = 161/293 (54%), Gaps = 21/293 (7%)

Query: 17  WLEKGLSDNTRQAYRSDLALFNGWLQEKNLELVNAGREL---ILDHLAWRLEQNYKP--- 70
           W E  L   T   YR  L     W  E+ L     GR++   IL+H    L Q  KP   
Sbjct: 188 WSETTLKTQTHHQYRFIL-----WAAERGLHY---GRDITLPILEHYQRHLYQYRKPNGE 239

Query: 71  ----RSTARFLSGVRGFYRYLLREKLIAVDPTLQVDMPQLGRPLPKS-LSEADVEALLAA 125
               R+    L  +  ++ ++ R  L+  DP   + +P+L + LP+  LS ADVE +LA 
Sbjct: 240 PLSTRTQRSQLGPLVVWFGWMTRHHLLLADPASGLVLPRLEKRLPRHILSVADVEQVLAL 299

Query: 126 PDLSEAIGQRDRAMLEVLYACGLRVTELISLTLEQVNLRQGVLRVM-GKGSKERLVPMGE 184
           PDL+   G RDRA++E+L++ G+R  E+  L +  V+  + ++ ++ GKG K+R++P+G+
Sbjct: 300 PDLTTLQGIRDRALMELLWSTGIRRGEVAVLEVYSVDASRHIVTIVQGKGKKDRVIPVGQ 359

Query: 185 EAIVWVERYMRDARSELLGGRPSDVLFPSLRG-EQMTRQTFWHRIKHQAKVAGIGKALSP 243
            A+ W+  Y++  R +LL       LF +L G E +T     + + H  K +GI K  S 
Sbjct: 360 RALRWLAYYLQAVRPQLLVNPHCPALFVALDGIEGLTPNGITNLVSHYIKASGIAKWGSC 419

Query: 244 HTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDMHAKHHP 296
           H  RHA AT +L +GADLR +Q +LGH+ + +TQIYT V+   LQ +HA  HP
Sbjct: 420 HLFRHAMATQMLENGADLRWIQAMLGHASVESTQIYTQVSIRALQAVHASTHP 472