Pairwise Alignments

Query, 569 a.a., ssDNA exonuclease RecJ from Pseudomonas simiae WCS417

Subject, 569 a.a., ssDNA-specific exonuclease RecJ from Pseudomonas putida KT2440

 Score = 1010 bits (2612), Expect = 0.0
 Identities = 505/569 (88%), Positives = 537/569 (94%)

Query: 1   MRIDPRPLPAVLPFLGELPPLLTRLYAARGVQSEAELDKSLARLIPYQQLKGIDAAVDLL 60
           MRI+PRPLP  LPFLG LPPLLTRLYAARGVQSEAELDKSLARL+PYQQLKGI+A VDLL
Sbjct: 1   MRIEPRPLPPTLPFLGNLPPLLTRLYAARGVQSEAELDKSLARLLPYQQLKGIEAGVDLL 60

Query: 61  VTALEQRQRILIVGDFDADGATASTVGTLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVAV 120
           V A++QRQRILIVGDFDADGATASTVG LGLRLLGAAHVDYLVPNRFEYGYGLTPEIV V
Sbjct: 61  VEAIDQRQRILIVGDFDADGATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEV 120

Query: 121 ALQRAPQLLITVDNGISSVEGVAAAKAAGLQVLVTDHHLPGDELPAADAIVNPNQPGCEF 180
           ALQR PQLLITVDNGISSV+GVAAAKAAGL+VLVTDHHLPG++LP ADAI+NPNQPGC F
Sbjct: 121 ALQRQPQLLITVDNGISSVDGVAAAKAAGLKVLVTDHHLPGEQLPDADAIINPNQPGCSF 180

Query: 181 PSKALAGVGVIFYVLMALRARLRSLGWYDNTPQPNIGELLDLVALGSVADVVPLDANNRI 240
           PSK+LAGVGVIFYVLMALRARLRSLG Y+  PQPNIGELLDLVALGSVADVVPLDANNRI
Sbjct: 181 PSKSLAGVGVIFYVLMALRARLRSLGRYEAQPQPNIGELLDLVALGSVADVVPLDANNRI 240

Query: 241 LVHQGLERIRAGRARPGIKAILEVAKRDAARITSTDLGFILGPRLNAAGRLDDMSLGIEC 300
           LVHQGLERIRAGRARPG+KAILEVA+RD  RITSTDLGFILGPRLNAAGRLDDMSLGIEC
Sbjct: 241 LVHQGLERIRAGRARPGLKAILEVARRDHRRITSTDLGFILGPRLNAAGRLDDMSLGIEC 300

Query: 301 LLTTDFAAAREMAAQLDGMNQDRKSIEQGMQREALAQLKDLPVESMPYGLCLFDPEWHQG 360
           LL  D A A++MA QLD +NQDRKSIEQGMQREALAQLKDLPVESMPYGLCLFD +WHQG
Sbjct: 301 LLCEDAALAQDMAQQLDDLNQDRKSIEQGMQREALAQLKDLPVESMPYGLCLFDADWHQG 360

Query: 361 VIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVQGFHIRDALAVVASQHPNLITKYGG 420
           VIGILASR+KERY RPTIAFADAGDG+LKGS RSV GFHIRDAL  VA++HP LI+K+GG
Sbjct: 361 VIGILASRLKERYHRPTIAFADAGDGMLKGSARSVPGFHIRDALDAVAARHPQLISKFGG 420

Query: 421 HAMAAGLTLPEENFPLFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHA 480
           HAMAAGL+LPE NF  FAEAFD EVRRQLREEDLTGRLLSDG+LAVEEFHL+LA+ALRHA
Sbjct: 421 HAMAAGLSLPEANFSAFAEAFDEEVRRQLREEDLTGRLLSDGSLAVEEFHLDLAKALRHA 480

Query: 481 GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVKLDGIAFGVDREVWPNPTVR 540
           GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSV+LDGIAFG+DREVWPNPTVR
Sbjct: 481 GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVRLDGIAFGIDREVWPNPTVR 540

Query: 541 WVELAYKLDVNEFRGNETVQLMIAHIEPR 569
           WVELAYKLDVNEFRGNE+VQLMIAH+EPR
Sbjct: 541 WVELAYKLDVNEFRGNESVQLMIAHMEPR 569