Pairwise Alignments

Query, 880 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 315 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  106 bits (265), Expect = 2e-27
 Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 15/310 (4%)

Query: 31  KYRQPIGLAVTLLLFAIALIACRHLLLELDLYALHDSILEVPKPALLGAFAAAVAGFIIL 90
           ++++P+ +A  L+L  +  +  R +    D   +  ++ +     L+ A A  +  F++ 
Sbjct: 9   RWKKPLTIAFFLVLIVLFTLLARRI----DWSEVVQTLGDFKVRTLVIAGALTLCSFLVY 64

Query: 91  LGYEFSGARYAGVNLPAKTLALGGFTAFAIGNAIGLSMLSGG-SVRYRLYARHGIGASEV 149
             ++  G  Y   NL  K +   G  ++A    + LS   GG ++RYRLY+R G+  S +
Sbjct: 65  ASFDLIGRTYIRQNLVWKQILPVGIISYAFN--LNLSAWVGGIAMRYRLYSRLGVSTSNI 122

Query: 150 ARMTVFASLALGTALPPLAALATLSNLPAASTYLHLPQAVLGGIAGAVLLLSAALCIGIY 209
           A++   +          +A +   S L        +    L GI   ++L S    +   
Sbjct: 123 AKILGLSLATNWFGYMAIAGVVFSSGLVTMPPGWKVSTTALQGIGALLVLASLGYLLACQ 182

Query: 210 RRRLPEQPYPDNLLVKAGRRTLRLPGRRLTFLQLIITALDVAAAATVLYMLLPEAPPFGP 269
                   +            + LP  R+  LQL++ AL+ +  A V++ LLP    +  
Sbjct: 183 --------FSKKRAWTIRGMEINLPSVRMACLQLMLGALNWSLMAAVIFTLLPAKLDYPL 234

Query: 270 FLLVYLLALAAGVLSHVPGGVGVFEAILLAAFADKLGAAPLAAALLLYRMIYVVLPLLIA 329
            L V L++  AGVL+H+P G+GV EA+ +A    +     L A L+ YR IY ++PLLIA
Sbjct: 235 VLGVLLISAIAGVLTHIPAGLGVLEAVFIALLQHEASRGSLLAGLIAYRAIYFIVPLLIA 294

Query: 330 CVFLLVNEAQ 339
            V  L  EA+
Sbjct: 295 LVMYLGVEAK 304