Pairwise Alignments

Query, 880 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 316 a.a., Inner membrane protein YbhQ from Variovorax sp. SCN45

 Score =  103 bits (256), Expect = 2e-26
 Identities = 84/281 (29%), Positives = 133/281 (47%), Gaps = 23/281 (8%)

Query: 66  DSILEVPKPALLGAFAAAVAGFIILLGYEFSGARYAGVNLPAKTLALGGFTAFAIGNAIG 125
           D+I  +P   LL A A A   F++   Y+  G       L   T+    F ++A    +G
Sbjct: 45  DAIRALPATTLLAAGAMAACSFVLYSTYDLLGRHLTRHRLGTGTVMGVTFISYAFNLNLG 104

Query: 126 LSMLSGGSVRYRLYARHGIGASEVARMTVFASLALGTALPPLAALATLS---NLPAA--- 179
            S++ G + RYRLY+R G+G   + R+  F+          +A +A      +LP     
Sbjct: 105 -SLVGGVAFRYRLYSRLGLGNETITRVLGFSMFTNWIGYLLVAGVAFCFWPLDLPPGWKI 163

Query: 180 -STYLHLPQAVLGGIAGAVLLLSAALCIGIYRRRLPEQPYPDNLLVKAGRRTLRLPGRRL 238
            +  L +  AVL  +A A +LL A +   ++R R                   + PG  +
Sbjct: 164 GNDGLRMLGAVLLMLAFAYVLLCAFVRGRVWRVR---------------GHAFKTPGLAM 208

Query: 239 TFLQLIITALDVAAAATVLYMLLPEAPPFGPFLLVYLLALAAGVLSHVPGGVGVFEAILL 298
             LQL ++  + +    V++ LL  A  +   L V L+A  AGV++HVP G+GV EA+ +
Sbjct: 209 ALLQLAMSCANWSLIGGVIWFLLQGAVGYPHVLAVLLVAAVAGVVTHVPAGLGVLEAVFV 268

Query: 299 AAFADKLGAAPLAAALLLYRMIYVVLPLLIACVFLLVNEAQ 339
           A  A ++  A L  ALL YR +Y +LPL +A +  LV E +
Sbjct: 269 ALLAHQVPEATLLGALLAYRGLYYLLPLTVATLGYLVTEVR 309