Pairwise Alignments

Query, 880 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 320 a.a., Predicted integral membrane protein from Enterobacter asburiae PDN3

 Score = 94.7 bits (234), Expect = 7e-24
 Identities = 73/268 (27%), Positives = 129/268 (48%), Gaps = 16/268 (5%)

Query: 76  LLGAFAAAVAGFIILLGYEFSGARYAGVNLPAKTLALGGFTAFAIGNAIGLSMLSGGSVR 135
           LLGA    +  +++   Y+  G  Y G  L  + + L  F  +A    +  + + G  +R
Sbjct: 51  LLGAVGLVIVSYLMYGCYDLLGRAYCGHKLAKRQVMLVSFICYAFNLTLS-TWVGGIGMR 109

Query: 136 YRLYARHGIGASEVARMTVFASLALGTALPPLAALATLSNLPAASTYLHLPQAVLGGIAG 195
           YRLY+R G+    + R+   +          L  +     +     + ++ +A L  I G
Sbjct: 110 YRLYSRLGLPGGTITRIFSLSITTNWLGYILLGGVIFTIGVVQLPAHWYIDEATLR-ILG 168

Query: 196 AVLLLSAALCI---GIYRRRLPEQPYPDNLLVKAGRRTLRLPGRRLTFLQLIITALDVAA 252
            VLLL  A+ +      +RR        ++ +K  +  L LP  +   LQ+ +++ +  A
Sbjct: 169 IVLLLIIAVYLWACAFAKRR--------HMTIKGQK--LVLPSWKFAVLQMAVSSANWMA 218

Query: 253 AATVLYMLLPEAPPFGPFLLVYLLALAAGVLSHVPGGVGVFEAILLAAFA-DKLGAAPLA 311
              ++++L+ E   +   L V L++  AGV+ H+P G+GV EA+ +A  A + +    + 
Sbjct: 219 MGAIIWLLIGEDVNYFFVLGVLLVSSIAGVIVHIPAGIGVLEAVFIALLAGEHVSQGTII 278

Query: 312 AALLLYRMIYVVLPLLIACVFLLVNEAQ 339
           AALL YRM+Y  LPL +A V  LV E++
Sbjct: 279 AALLAYRMLYYFLPLALATVCYLVLESR 306