Pairwise Alignments

Query, 352 a.a., DNA polymerase IV from Pseudomonas simiae WCS417

Subject, 433 a.a., DNA polymerase IV from Xanthobacter sp. DMC5

 Score =  205 bits (521), Expect = 2e-57
 Identities = 133/339 (39%), Positives = 188/339 (55%), Gaps = 15/339 (4%)

Query: 6   IIHVDCDCFYAAIEMRDDPSLAQKPLAVGGSADRRGVIATCNYEARAYGVRSAMSSRHAL 65
           + HVDCD FYAA+E RD+P LA  PL +GG   +RGV++T  Y AR +GVRSAM    AL
Sbjct: 44  VAHVDCDAFYAAVEKRDNPDLAHVPLIIGGG--KRGVVSTACYIARIHGVRSAMPMFKAL 101

Query: 66  KLCPDLTIVKPRMEAYKEASKEIQTIFRDYTDLIEPLSLDEAYLDVS--DSSHFGGSATR 123
            LCPD  ++KP ME Y +  +E++   +  T L+EPLS+DEA+LD+S  ++ H    A  
Sbjct: 102 ALCPDAVVLKPNMEKYVKVGREVRARMKALTPLVEPLSIDEAFLDLSGTEALHQASPART 161

Query: 124 IAQDIRRRVSNQLHITVSAGVAPNKFLAKIASDWKKPNGLFVITPDQVEDFVSQLRVSKL 183
           +A+   R V  ++ ITVS G+A NKFLAKIASD  KP G  VI   +  +F++   V+ +
Sbjct: 162 LAR-FARDVEREVGITVSVGLAANKFLAKIASDLDKPRGFSVIGQSEAAEFLAPRPVTFI 220

Query: 184 HGVGKVTADKLARLGIEDCLQLREWNKLALVREFGSFGERLWSLARGIDDRVVQNDSRRQ 243
            GVG     KLAR G      L+      L R +G+ G RL  LA G+D R V+ +   +
Sbjct: 221 WGVGAAFGGKLARDGFSTIGDLQRAEPADLARRYGAEGLRLSRLAFGLDTRKVEPEREAK 280

Query: 244 SISVENTYDVDLPDLSSCLAKLPELMETLAGRMARIDSSYRAGKPFVKVKFHDFTQTTLE 303
           S+S E T+D D+  L      L  L E ++ R+ R   + R+    +K+K  DF   T  
Sbjct: 281 SVSAETTFDRDIGALRPLEQTLYALSEEVSERLKRAGIAGRS--VTLKLKSADFRLRTRS 338

Query: 304 Q------AGAGRDLESYQQLLTQAFNRGGKPVRLLGIGV 336
           +        A R   +  +LL +     G   RL+G+GV
Sbjct: 339 RTLDAPTCLAARINAAAHELLVK--ETDGTLFRLIGVGV 375