Pairwise Alignments

Query, 1008 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

Subject, 1037 a.a., RND efflux system, inner membrane transporter CmeB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  559 bits (1440), Expect = e-163
 Identities = 349/1031 (33%), Positives = 579/1031 (56%), Gaps = 38/1031 (3%)

Query: 7    FIRRPVLAMVVSLLIVLLGFQAYSTLPLRQYPSMENALITVTTAYPGANAETIQGYITQP 66
            FIRRP+ A V+++++++ G  A   LP+ QYP++    ++++  YPGA+A+T+Q  +TQ 
Sbjct: 5    FIRRPIFAWVLAIILMMAGALAIMQLPVAQYPTIAPPAVSISATYPGADAQTVQDTVTQV 64

Query: 67   LQQSLASAEGIDYMTSVSRQNFSV-ISIYARIGSNSDRLFTELLAKANEVKNKLPQDAED 125
            ++Q++   + + YM+S S    SV I++  + G++ D    ++  K       LPQ+ + 
Sbjct: 65   IEQNMNGIDNLMYMSSTSDSAGSVTITLTFQSGTDPDIAQVQVQNKLQLATPLLPQEVQQ 124

Query: 126  PVLSKEAADASALMYISFSSGQLSNPQ--ITDYLSRVIQPKLATLPGMAEAEILGNQVFA 183
              +S E + +S LM   F S   +  Q  I+DY++  I+  ++ L G+ + ++ G Q +A
Sbjct: 125  QGISVEKSSSSFLMVAGFVSDNPNTTQDDISDYVASNIKDSISRLNGVGDVQLFGAQ-YA 183

Query: 184  MRIWLDPVKLAGFGLSASDITDAVRRYNFLSAAGEV------KGEFVVTSINANTDLKSA 237
            MRIWLD   L  + L+  D+ + ++  N   AAG++       G+ +  SI A T LK  
Sbjct: 184  MRIWLDANLLNKYQLTPVDVINQLKVQNDQIAAGQLGGTPALPGQQLNASIIAQTRLKDP 243

Query: 238  EAFGAISVKTDGDSRVL-LRDVARVEMGAENYNAISSFGGTPSVYIGIKATPSANPLDVI 296
            E FG ++++ + D  V+ L+DVAR+E+G ENYN ++   G P+  +GIK    AN LD  
Sbjct: 244  EEFGKVTLRVNTDGSVVHLKDVARIELGGENYNVVARINGKPASGLGIKLATGANALDTA 303

Query: 297  KEVRKILPELESQLPPNLKAEIAYDATLFIQASINEVVKTLFEAVLIVIVVVFLFLGALR 356
              ++  L EL+   P  +K    YD T F++ SI+EVVKTLFEA+++V +V++LFL  +R
Sbjct: 304  TAIKVKLAELQPFFPQGMKVVYPYDTTPFVKISIHEVVKTLFEAIILVFLVMYLFLQNIR 363

Query: 357  SVVIPVITIPLSMIGVLFFMQLMGYSINLLTLLAMVLAIGLVVDDAIVVVENIHR-HIEE 415
            + +IP I +P+ ++G    +   GYSIN LT+  MVLAIGL+VDDAIVVVEN+ R  +E+
Sbjct: 364  ATLIPTIAVPVVLLGTFAVLAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVMMED 423

Query: 416  GKTPLDAALEGAREIALPVVSMTITLAAVYAPIGFLEGLTGALFKEFALTLAGAVIISGI 475
              +P +A  +   +I   +V + + L+AV+ P+ F  G TGA++++F++T+  A+ +S +
Sbjct: 424  NLSPREATEKSMSQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMALSVL 483

Query: 476  VALTLSPMMCALLLR-----HDENPSGLAHRLDRMFDGLKRRYQRMLHGTL-NTRPVVIV 529
            VAL L+P +CA LL+     H E  SG     +  FD     Y   + G + NT   +I+
Sbjct: 484  VALILTPALCATLLKPVSAEHHEKKSGFFGWFNTRFDHSVNHYTNSVSGIVRNTGRYLII 543

Query: 530  FALIVLCLIPVFLKFTQSQLAPDEDQGIIFMIASAP----QPTNLEYLNTYTDEFINIFK 585
            + LIV+ +  +FL+   S L P+EDQG+   +   P    Q    + L+  T  ++N  K
Sbjct: 544  YLLIVVGMAVLFLRLPTSFL-PEEDQGVFLTMIQLPSGATQERTQKVLDQVTHYYLNNEK 602

Query: 586  AFPEYYSSFQINGFN----GVQSGIGGFLLKPWNER---DRTQMQILPEVQKRLEQIPGL 638
            A  E  S F +NGF+    G  SG+    LKPW ER   + +   ++    +   QI   
Sbjct: 603  ANVE--SVFTVNGFSFSGQGQNSGMAFVSLKPWEERNGEENSVEAVIARATRAFSQIRDG 660

Query: 639  QVFGFNLPSLP--GTGEGLPFGFVINTANDYESLLEVANRVKKR-AMESGKFAFVDIDLA 695
             VF FN+P++   GT  G  F  +      +++L +  N++    A        V  +  
Sbjct: 661  LVFPFNMPAIVELGTATGFDFELIDQGGLGHDALTKARNQLLGMVAKHPDLLVRVRPNGL 720

Query: 696  FDKPEVVVDIDRAKAAQMGVSMQDLGGTLATLLAEAEINRFTLDGRSYKVIAQVERTYRD 755
             D P+  +D+D+ KA  +GVS+ D+  T++  L    +N F   GR  KV  Q +  +R 
Sbjct: 721  EDTPQFKLDVDQEKAQALGVSLSDINETISAALGGYYVNDFIDRGRVKKVYVQADAQFRM 780

Query: 756  NPEWLNNYYVKNAQGEVLPLSTLITVTDRARPRQLNQFQQLNSALISG--FPIVSMGEAI 813
             P  +NN YV++A GE++P ST  +        +L ++  + S  + G   P  S GEA+
Sbjct: 781  LPGDINNLYVRSANGEMVPFSTFSSARWIYGSPRLERYNGMPSMELLGEAAPGRSTGEAM 840

Query: 814  DTVRQIAIEETPPGYAFDYSGASRQFIQEGTALWATFGLALAIIFLVLAAQFESFRDPLV 873
              +  +A  + P G  +D++G S Q    G    A + ++L ++FL LAA +ES+  P  
Sbjct: 841  SLMENLA-SQLPNGIGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFS 899

Query: 874  ILVTVPLSICGALIPLFLGWSSMNIYTQVGLVTLIGLISKHGILIVEFANQLRKDKGLTP 933
            +++ VPL + GAL+   L   + ++Y QVGL+T IGL +K+ ILIVEFA  L + +G   
Sbjct: 900  VMLVVPLGVVGALLAASLRGLNNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMEKEGRGL 959

Query: 934  RQAVEEAAAIRLRPVLMTTAAMVFGMVPLILATGAGAVSRFDIGMVIATGMSIGTLFTLF 993
             +A  EA+ +RLRP+LMT+ A + G++PL+++ GAG+ ++  +G  +  GM   TL  +F
Sbjct: 960  IEATLEASRMRLRPILMTSLAFILGVMPLVISRGAGSGAQNAVGTGVMGGMLTATLLAIF 1019

Query: 994  VLPCVYTLLAK 1004
             +P  + ++ +
Sbjct: 1020 FVPVFFVVVKR 1030