Pairwise Alignments

Query, 1008 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

Subject, 1049 a.a., Multidrug efflux pump subunit AcrB from Escherichia fergusonii Becca

 Score =  562 bits (1448), Expect = e-164
 Identities = 352/1032 (34%), Positives = 577/1032 (55%), Gaps = 39/1032 (3%)

Query: 7    FIRRPVLAMVVSLLIVLLGFQAYSTLPLRQYPSMENALITVTTAYPGANAETIQGYITQP 66
            FI RP+ A V++++I+L G  A   LP+ QYP++    +T++ +YPGA+A+T+Q  +TQ 
Sbjct: 5    FIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDTVTQV 64

Query: 67   LQQSLASAEGIDYMTSVSRQNFSV-ISIYARIGSNSDRLFTELLAKANEVKNKLPQDAED 125
            ++Q++   + + YM+S S    +V I++    G+++D    ++  K       LPQ+ + 
Sbjct: 65   IEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQEVQQ 124

Query: 126  PVLSKEAADASALMYISF--SSGQLSNPQITDYLSRVIQPKLATLPGMAEAEILGNQVFA 183
              +S E + +S LM +    + G ++   I+DY++  ++  ++   G+ + ++ G+Q +A
Sbjct: 125  QGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGSQ-YA 183

Query: 184  MRIWLDPVKLAGFGLSASDITDAVRRYNFLSAAGE------VKGEFVVTSINANTDLKSA 237
            MRIW++P +L  F L+  D+  A++  N   AAG+      VKG+ +  SI A T L S 
Sbjct: 184  MRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRLTST 243

Query: 238  EAFGAISVKTDGD-SRVLLRDVARVEMGAENYNAISSFGGTPSVYIGIKATPSANPLDVI 296
            E FG I +K + D SRVLLRDVA++E+G ENY+ I+ F G P+  +GIK    AN LD  
Sbjct: 244  EEFGKILLKVNQDGSRVLLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANALDTA 303

Query: 297  KEVRKILPELESQLPPNLKAEIAYDATLFIQASINEVVKTLFEAVLIVIVVVFLFLGALR 356
              +R  L ++E   P  LK    YD T F++ SI+EVVKTL EA+++V +V++LFL   R
Sbjct: 304  AAIRAELAKMEPFFPSGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQNFR 363

Query: 357  SVVIPVITIPLSMIGVLFFMQLMGYSINLLTLLAMVLAIGLVVDDAIVVVENIHRHI-EE 415
            + +IP I +P+ ++G    +   G+SIN LT+  MVLAIGL+VDDAIVVVEN+ R + EE
Sbjct: 364  ATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEE 423

Query: 416  GKTPLDAALEGAREIALPVVSMTITLAAVYAPIGFLEGLTGALFKEFALTLAGAVIISGI 475
            G  P +A  +   +I   +V + + L+AV+ P+ F  G TGA++++F++T+  A+ +S +
Sbjct: 424  GLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSVL 483

Query: 476  VALTLSPMMCALLLR------HDENPSGLAHRLDRMFDGLKRRYQRMLHGTL-NTRPVVI 528
            VAL L+P +CA +L+      H E   G     +RMF+     Y   + G L +T   ++
Sbjct: 484  VALILTPALCATMLKPIAKGDHGEGKKGFFGWFNRMFEKSTHHYTDSVGGILRSTGRYLV 543

Query: 529  VFALIVLCLIPVFLKFTQSQLAPDEDQGIIFMI----ASAPQPTNLEYLNTYTDEFINIF 584
            ++ +IV+ +  +F++   S L PDEDQG+   +    A A Q    + LN  T  ++   
Sbjct: 544  LYLIIVVGMAYLFVRLPSSFL-PDEDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLTKE 602

Query: 585  KAFPEYYSSFQINGF----NGVQSGIGGFLLKPWNERDRTQMQ---ILPEVQKRLEQIPG 637
            K   E  S F +NGF     G  +GI    LK W +R   + +   I     +   QI  
Sbjct: 603  KNNVE--SVFAVNGFGFAGRGQNTGIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKD 660

Query: 638  LQVFGFNLPSLP--GTGEGLPFGFVINTANDYESLLEVANR-VKKRAMESGKFAFVDIDL 694
              VF FNLP++   GT  G  F  +      +E L +  N+ + + A        V  + 
Sbjct: 661  AMVFAFNLPAIVELGTATGFDFELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNG 720

Query: 695  AFDKPEVVVDIDRAKAAQMGVSMQDLGGTLATLLAEAEINRFTLDGRSYKVIAQVERTYR 754
              D P+  +DID+ KA  +GVS+ D+  TL      + +N F   GR  KV    E  YR
Sbjct: 721  LEDTPQFKIDIDQEKAQALGVSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYR 780

Query: 755  DNPEWLNNYYVKNAQGEVLPLSTLITVTDRARPRQLNQFQQLNSALISG--FPIVSMGEA 812
              P+ + ++YV+ A G+++P S   +        +L ++  L S  I G   P  S GEA
Sbjct: 781  MLPDDIGDWYVRAADGQMVPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEA 840

Query: 813  IDTVRQIAIEETPPGYAFDYSGASRQFIQEGTALWATFGLALAIIFLVLAAQFESFRDPL 872
            ++ + Q+A  + P G  +D++G S Q    G    + + ++L ++FL LAA +ES+  P 
Sbjct: 841  MELMEQLA-SKLPTGVGYDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPF 899

Query: 873  VILVTVPLSICGALIPLFLGWSSMNIYTQVGLVTLIGLISKHGILIVEFANQLRKDKGLT 932
             +++ VPL + GAL+       + ++Y QVGL+T IGL +K+ ILIVEFA  L   +G  
Sbjct: 900  SVMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKG 959

Query: 933  PRQAVEEAAAIRLRPVLMTTAAMVFGMVPLILATGAGAVSRFDIGMVIATGMSIGTLFTL 992
              +A  +A  +RLRP+LMT+ A + G++PL+++TGAG+ ++  +G  +  GM   T+  +
Sbjct: 960  LIEATLDAVRMRLRPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAI 1019

Query: 993  FVLPCVYTLLAK 1004
            F +P  + ++ +
Sbjct: 1020 FFVPVFFVVVRR 1031