Pairwise Alignments

Query, 376 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 360 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  140 bits (352), Expect = 7e-38
 Identities = 98/359 (27%), Positives = 171/359 (47%), Gaps = 17/359 (4%)

Query: 6   MLIMLGVVLLIVLLLAGYKAFSIYQQIQVFSKPKPAVSVAVATATEQPWQLRVSSVGTLK 65
           +++++ V+ L   L  G  +    +  Q   +   A+ V V   T +  +  ++  G + 
Sbjct: 13  IVVVIAVIFLFPRLQGGDTSKEPSKSPQSTPEAMTALPVDVVEVTPERLENNLNVTGNVL 72

Query: 66  ALQGVNLSLEIAGTVKDVQFESGQKVKTGQPLVQLDSAVESALLETAQADLGLAQLDYGR 125
           + + V+L  EI G V+ + FE GQ VK G PLV L+    +A L+  +    L +    R
Sbjct: 73  SNESVSLRAEITGLVESINFEEGQFVKKGTPLVYLNDDELTAQLDRLEYTKKLYEGQESR 132

Query: 126 GSQLVGSQAISKGEFDRLSAQLQKNKATVNQLKASLAKKHIVAPFGGTIGIRQVDVGDYL 185
             QL+  +AIS+ E+D +  Q     + +  +KA L K  I APF G +G+RQ+  G  +
Sbjct: 133 QKQLLAREAISQEEYDIILNQYNTTLSDIKLVKAQLDKTVIKAPFDGVLGLRQISAGSVI 192

Query: 186 ASGTVIATLQDLSSLYVDFYIPEHAVPKVAPGQPVQVEVSAYPGEQFPGSISAINPKVEN 245
           ++  +IA + ++  + ++F IPE    +V  G  ++   +A  G +  G + A  P ++ 
Sbjct: 193 STTDIIANIVNIDPIKIEFSIPERYASQVQVGSTIEFSNNASHGLK-KGKVYAYEPVIDA 251

Query: 246 STRNVLVRATLANPEGKLLPGMFTRLDVLLPNPAPQIVVPEGAITYTLYGNSVYAVAEKK 305
           +TR + +RA   N + K LPGMF  +   L      ++VP  ++   L G  ++ V +  
Sbjct: 252 NTRTLTLRAISPNEDRKFLPGMFVNIRFNLEVEEDALLVPSQSLIPELNGYKLFLVNQ-- 309

Query: 306 TEGGEVEKDADGKPLLIAERRFVETGERRGGLVLVSKGLKAGEQVVSAGQLKLDNGTPI 364
            EG             I + R V+ G R    V +  GL  GE V++ G L+   G  +
Sbjct: 310 -EG-------------IVQERQVQIGIRTDSEVQILDGLSPGEMVLTTGVLQAKEGMKV 354