Pairwise Alignments

Query, 376 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 349 a.a., Multidrug transporter MdtA from Alteromonas macleodii MIT1002

 Score =  173 bits (438), Expect = 7e-48
 Identities = 112/360 (31%), Positives = 188/360 (52%), Gaps = 19/360 (5%)

Query: 8   IMLGVVLLIVLLLAGYKAF-SIYQQIQVFSKPKPAVSVAVATATEQPWQLRVSSVGTLKA 66
           + L  +LL V+LLAG   + ++ ++    +    A  V  A  + Q + + + S+GT  A
Sbjct: 5   LSLSPLLLGVVLLAGVVVYLNMPEEESASNSIVRATPVKTALVSSQAFPITIESLGTATA 64

Query: 67  LQGVNLSLEIAGTVKDVQFESGQKVKTGQPLVQLDSAVESALLETAQADLGLAQLDYGRG 126
            + VN++ ++  TVK + FE G K   G+ LVQL++  E A +E  +A++  A+  + R 
Sbjct: 65  NESVNITAQVTDTVKTINFEDGDKATEGELLVQLNNTEERARVEELKANIDEAKRQFTRI 124

Query: 127 SQLVGSQAISKGEFDRLSAQLQKNKATVNQLKASLAKKHIVAPFGGTIGIRQVDVGDYLA 186
           S L  S A S+   D   A+++  +A ++   A L    I APF G +G R++ +G  + 
Sbjct: 125 SDLRQSNATSEQLLDEQQARVKALQAQLDVALAQLNDLQIRAPFSGLLGNREISIGSLVQ 184

Query: 187 SGTVIATLQDLSSLYVDFYIPEHAVPKVAPGQPVQVEVSAYPGEQFPGSISAINPKVENS 246
            G  I TL D+S + VDF I E  +  VA GQ +     AYPGE+F G IS I+ +++  
Sbjct: 185 PGDTITTLDDISLIKVDFSIAESHLASVAKGQALSASSVAYPGEEFTGKISNIDTRLDPI 244

Query: 247 TRNVLVRATLANPEGKLLPGMFTRLDVLLPNPAPQIVVPEGAITYTLYGNSVYAVAEKKT 306
           +R++ VRAT+ N + +L PGM   + ++       +V+PE A+        VY V +   
Sbjct: 245 SRSIRVRATIDNQDNRLRPGMLLTV-IVEKRVLNTLVLPEKALVPVQDKQYVYVVKDN-- 301

Query: 307 EGGEVEKDADGKPLLIAERRFVETGERRGGLVLVSKGLKAGEQVVSAGQLKLDNGTPIAI 366
                          +A +  V  GERR GLV +  GL  G++V++ G L++ + +P+ +
Sbjct: 302 ---------------VAHQTEVVIGERRPGLVQIVSGLNEGDEVITEGTLRVRDQSPVNV 346