Pairwise Alignments

Query, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 639 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  265 bits (678), Expect = 4e-75
 Identities = 159/359 (44%), Positives = 224/359 (62%), Gaps = 9/359 (2%)

Query: 354 QAAGTLKALLVGAAAALLGLLLIWLTATGVTRPINNVAAMLKDIASGDGDLTQRLAYAKK 413
           Q   TL ALLVG  AAL+           +TRPI    A+++ IASGD  L+  +   ++
Sbjct: 290 QLISTLLALLVGVIAALV-------ITRQITRPIQETLAVVERIASGD--LSHNIQVTRR 340

Query: 414 DELGELANWFNRFLDKLQPTIAQIKQSITEARGTADQSSAIARQTSEGMQVQFREIDQVA 473
           DELG L     R    L+  I+ I+  +T+    A++ SA+  QTS G+  Q  E DQVA
Sbjct: 341 DELGVLQQGIQRMGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKIETDQVA 400

Query: 474 TASNEMSATAHDVANSASNAASAARGADQSAREGMSIIEQSTRDITSLAEEVSKAVGEVE 533
           TA +EM+AT  +VA +A  A+ AA  AD  AR G  ++ ++   I  LA EV+++   + 
Sbjct: 401 TAMHEMTATVQEVARNAEQASLAAADADGQARAGDKVVAEAIAQIERLAAEVARSTDAMT 460

Query: 534 ALAVNSEQIGSVLEVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRNLAKRTQD 593
            L   S +IGSV++VI+++AEQTNLLALNAAIEAARAGE+GRGFAVVADEVR LA+RTQ 
Sbjct: 461 HLQQESNKIGSVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQK 520

Query: 594 SVEEIRLVIERIQSGTRGVVATMHSSQSQAQSNAGQIHQAAQALGKISDAVTVISDMNLQ 653
           S EEI  ++  +Q+GT+ V   M++S+S   S+     +A  +L  I+  V+ I  MN Q
Sbjct: 521 STEEIEGLVAGLQNGTQQVANVMNNSRSLTDSSVELTRKAGVSLENITRTVSNIQSMNQQ 580

Query: 654 IASAAEQQSAVAEEVNRNVSAIRTVTETLTGQATESAAISSQLNALASQQMKLMDQFRV 712
           IA+AAEQQSAVAEE++R++  +R V+E     + E+A  S +L  L SQ  +++  FRV
Sbjct: 581 IAAAAEQQSAVAEEISRSIVNVRDVSEQTATASDETAKSSVELARLGSQLQQMVSHFRV 639



 Score = 26.2 bits (56), Expect = 0.005
 Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 667 EVNRNVSAIRTVT-ETLTGQATESAA--ISSQLNALASQQMKLMDQFR 711
           ++N +++ +R V  + +     E+ A  + + L+A A+QQ KL+D F+
Sbjct: 51  QLNASLTKLRIVRLQYMLANGDEAVAQNVQTNLDAFAAQQQKLIDSFK 98