Pairwise Alignments

Query, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 715 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  683 bits (1763), Expect = 0.0
 Identities = 372/711 (52%), Positives = 499/711 (70%), Gaps = 4/711 (0%)

Query: 5   LSIRLKIVLLSGLCLLGVIALIISINLYETNQNDQLISDSSSRMLTSSVQSLLQSKAGEQ 64
           LSI+ KI LL+GLCLLG++ L++ ++LY   Q+ Q +  SS +ML  + Q+ ++++   Q
Sbjct: 6   LSIQWKITLLAGLCLLGIVTLLVGLSLYRMEQSSQQVKASSMQMLDEAAQARIEAQGEVQ 65

Query: 65  AVLLQKTFGENLLVVTALADQVKDLRALAAKRALEPGALREELNQSLKTTFERNSKVLGI 124
           A+ +++ F +        + QV  LR  A KR L+    RE+L + +K   + N  +LG+
Sbjct: 66  ALGIRRQFMDAYQYGHGFSRQVLFLREQAEKRFLDAFDTREDLTRQVKAALQANPDLLGL 125

Query: 125 WLSFEPNGLDGKDSEFVDDKARVSNEKGRFSSYWSRAGGEGLNTIMV-EDDLTKTTPNLS 183
            L FE N LDGKD  F       SN+KGRF+ YWS+     L ++ + E D++ T+   S
Sbjct: 126 SLVFEANALDGKDELFAGQAELGSNDKGRFALYWSQPTPGKLESMALPESDMSDTSVGPS 185

Query: 184 GTPYNIWYTCPRDTRKVCLLDPYADEVAGKQMLMTTISLPLMVDGNVIGVVGIDIALNTL 243
           G   N W+TCPR   K C+++PY   + G+ +LMT+I  PLM +G VI  + +DI LN+L
Sbjct: 186 GEKANAWFTCPRTLLKPCVIEPYFYRINGQNVLMTSIVFPLMANGKVIASLSVDINLNSL 245

Query: 244 QAVTDAAQKELFNGAAHLDILSSTGLIAASSGQPEIVGKTLMDTVGAEGKEIVQLLASDS 303
           QAV+  A ++L++G   + ILS TGL+A  S     + + L     A G +++  LAS S
Sbjct: 246 QAVSQQASQKLYDGQTQVSILSPTGLLAGYSPDASKLSQRLDQVDTANGAQLIGALAS-S 304

Query: 304 PMIRE--QDHTIRAVYPVKPIADAKSWGVVVTLPRNVMLADTLKLQDVLDKAQAAGTLKA 361
             IR    DH ++ + P  PI + K WGV++ +P  V++     L+  +D     GTL  
Sbjct: 305 THIRSLRTDHQLKVLAPFAPIPEGKPWGVLLDVPEKVLVGPAEALKAQMDAENTRGTLLE 364

Query: 362 LLVGAAAALLGLLLIWLTATGVTRPINNVAAMLKDIASGDGDLTQRLAYAKKDELGELAN 421
           L +G  AA++GL+L+WL A  VTRPI  VA ML+DIASG+GDLT+RLAY K+DELG+LA 
Sbjct: 365 LGLGLLAAVVGLILVWLMARSVTRPILGVAHMLEDIASGEGDLTRRLAYDKQDELGQLAG 424

Query: 422 WFNRFLDKLQPTIAQIKQSITEARGTADQSSAIARQTSEGMQVQFREIDQVATASNEMSA 481
           WFNRFLDKLQP IA++K+S+ +ARGTADQS+AIA QTS GM+ Q+R++DQVATAS+EMSA
Sbjct: 425 WFNRFLDKLQPIIAEVKRSVQDARGTADQSAAIATQTSAGMEQQYRQVDQVATASHEMSA 484

Query: 482 TAHDVANSASNAASAARGADQSAREGMSIIEQSTRDITSLAEEVSKAVGEVEALAVNSEQ 541
           TA DVA SA+ AA AAR ADQ+ R+G+++IE +T +I +LA ++S A+ +VE LA NSE+
Sbjct: 485 TAQDVARSAAQAAQAARDADQATRDGLTVIEHTTHNIGALASDMSTAMTQVEGLAANSEK 544

Query: 542 IGSVLEVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRNLAKRTQDSVEEIRLV 601
           IGSVLEVIR IAEQTNLLALNAAIEAARAGE+GRGFAVVADEVRNLA+RTQ+SVEE RLV
Sbjct: 545 IGSVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQESVEETRLV 604

Query: 602 IERIQSGTRGVVATMHSSQSQAQSNAGQIHQAAQALGKISDAVTVISDMNLQIASAAEQQ 661
           IE +Q+GT  VV +M +S  QAQ +  Q+ QA  AL +I DAVTVISDMNLQIASAAE+Q
Sbjct: 605 IEHLQNGTEAVVGSMGNSYRQAQGSVEQVGQAVTALRQIGDAVTVISDMNLQIASAAEEQ 664

Query: 662 SAVAEEVNRNVSAIRTVTETLTGQATESAAISSQLNALASQQMKLMDQFRV 712
           SAVAEE+N NV+ IR VTE+L+ QA ESA +S  LN+LA+QQ  LMDQFRV
Sbjct: 665 SAVAEEINNNVATIRDVTESLSEQANESARVSQALNSLANQQQGLMDQFRV 715