Pairwise Alignments

Query, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 639 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  279 bits (713), Expect = 3e-79
 Identities = 182/461 (39%), Positives = 258/461 (55%), Gaps = 25/461 (5%)

Query: 268 GLIAASSGQPEIVGKTLMDTVGAEGKEIVQLLASDSPMIREQDHTIRAVYP-VKPIADAK 326
           G IA +S   E      +D   A+   + + L S+   +++ ++ + A    V+   DA 
Sbjct: 188 GYIAENSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFRDAV 247

Query: 327 SWGVVVTLPRNVMLADTLKLQDVLDKAQ---------------AAGTLKALLVGAAAALL 371
           +          V  AD +K  D L + Q               A  TL ALLVG  AA+L
Sbjct: 248 ANITTSRAEMTVQGADIVKRSDALYQIQLERRDIESTQARSLQAIATLLALLVGVLAAVL 307

Query: 372 GLLLIWLTATGVTRPINNVAAMLKDIASGDGDLTQRLAYAKKDELGELANWFNRFLDKLQ 431
                      +TRP+ +    ++ IASGD  LTQ +   ++DELG L     R    L+
Sbjct: 308 -------ITRQITRPLQDTLVAVEKIASGD--LTQHMRVTRRDELGVLQQGIARMGTTLR 358

Query: 432 PTIAQIKQSITEARGTADQSSAIARQTSEGMQVQFREIDQVATASNEMSATAHDVANSAS 491
             I+ I+  +T+    A++ SA+  QTS G   Q  E DQVATA +EM+AT  +VA +A 
Sbjct: 359 ELISGIRDGVTQIASAAEELSAVTEQTSAGANSQKVETDQVATAMHEMAATVQEVARNAE 418

Query: 492 NAASAARGADQSAREGMSIIEQSTRDITSLAEEVSKAVGEVEALAVNSEQIGSVLEVIRS 551
            A+ AA GAD  AR G  ++ ++   I  LAE++ ++   +  L   S++IGSV++VI+S
Sbjct: 419 QASHAATGADDEARAGDRVVGEAIGQIERLAEDMHRSTEAMNLLQQESQKIGSVMDVIKS 478

Query: 552 IAEQTNLLALNAAIEAARAGESGRGFAVVADEVRNLAKRTQDSVEEIRLVIERIQSGTRG 611
           +AEQTNLLALNAAIEAARAGE+GRGFAVVADEVR LA+RTQ S EEI  +I  +Q GT+ 
Sbjct: 479 VAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEELIASLQHGTQQ 538

Query: 612 VVATMHSSQSQAQSNAGQIHQAAQALGKISDAVTVISDMNLQIASAAEQQSAVAEEVNRN 671
           V   M  S++   S+     +A  +L  I+  V+ I  MN QIA+AAEQQSAVAEE++R+
Sbjct: 539 VANAMQGSRALTDSSVELARKAGSSLESITSTVSSIQSMNQQIAAAAEQQSAVAEEISRS 598

Query: 672 VSAIRTVTETLTGQATESAAISSQLNALASQQMKLMDQFRV 712
           +  +R V+E     + E+AA S +L  L  Q   L+ QFRV
Sbjct: 599 ILNVRDVSEQTAAASDETAASSVELARLGGQLQTLVSQFRV 639