Pairwise Alignments

Query, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 714 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  692 bits (1786), Expect = 0.0
 Identities = 372/709 (52%), Positives = 491/709 (69%), Gaps = 1/709 (0%)

Query: 5   LSIRLKIVLLSGLCLLGVIALIISINLYETNQNDQLISDSSSRMLTSSVQSLLQSKAGEQ 64
           LSI+ KI LL+GLCL  ++ L++ ++LY  + +  L+  SS +MLT + QS ++S+   Q
Sbjct: 6   LSIQWKITLLAGLCLAAIVTLLVGLSLYRMDHSSDLVKASSMQMLTEAAQSRIESQGEVQ 65

Query: 65  AVLLQKTFGENLLVVTALADQVKDLRALAAKRALEPGALREELNQSLKTTFERNSKVLGI 124
           A+ +++ F +        A QV  LR  A KR L+   LRE++ + ++   + N  +LG+
Sbjct: 66  ALNIRRQFMDAYQYGAGFARQVLFLREQAEKRFLDAFDLREDMTRQVRAALQANPDLLGL 125

Query: 125 WLSFEPNGLDGKDSEFVDDKARVSNEKGRFSSYWSRA-GGEGLNTIMVEDDLTKTTPNLS 183
            L FEPN LD KDS F       SNE GRF+ YWS+   G+  +  + E D+  T    S
Sbjct: 126 SLVFEPNALDNKDSLFAGKAELGSNETGRFALYWSQPRAGQLTSMALPEHDMANTEIGPS 185

Query: 184 GTPYNIWYTCPRDTRKVCLLDPYADEVAGKQMLMTTISLPLMVDGNVIGVVGIDIALNTL 243
           G P N W+ CPR + KVC+++PY  ++ G+Q+LMT+I  PL V+G +I  + IDI LN+L
Sbjct: 186 GQPANTWWVCPRTSGKVCVVEPYFYDIDGQQVLMTSIVFPLAVNGKIIATLSIDINLNSL 245

Query: 244 QAVTDAAQKELFNGAAHLDILSSTGLIAASSGQPEIVGKTLMDTVGAEGKEIVQLLASDS 303
           QA++  A + L+ G   + IL+  GL+A  S     + +        +G E+V+ LA   
Sbjct: 246 QALSQEASRSLYEGRTTVGILTPVGLLAGYSADASKLAQRFDQVDPTKGAELVRKLADGK 305

Query: 304 PMIREQDHTIRAVYPVKPIADAKSWGVVVTLPRNVMLADTLKLQDVLDKAQAAGTLKALL 363
                    ++ +   +PI DA+ WGV++ +P N +      L+  LD    +GTL  L 
Sbjct: 306 LTTLHDRQRLKVLAAFRPIPDAQPWGVLLDVPENALTGPAETLKQELDALNTSGTLLELS 365

Query: 364 VGAAAALLGLLLIWLTATGVTRPINNVAAMLKDIASGDGDLTQRLAYAKKDELGELANWF 423
           +G AAA++GLLL+WL A GVTRPI  VAAMLKDIASG+GDLT+RL Y K+DELGELA WF
Sbjct: 366 LGLAAAIVGLLLVWLMARGVTRPILGVAAMLKDIASGEGDLTRRLTYQKQDELGELAGWF 425

Query: 424 NRFLDKLQPTIAQIKQSITEARGTADQSSAIARQTSEGMQVQFREIDQVATASNEMSATA 483
           NRFLDKLQPTIA++K+S+  ARGTADQSSAIA +TS GM+ Q+R++DQVATAS+EMSATA
Sbjct: 426 NRFLDKLQPTIAEVKRSVQAARGTADQSSAIATETSAGMEQQYRQVDQVATASHEMSATA 485

Query: 484 HDVANSASNAASAARGADQSAREGMSIIEQSTRDITSLAEEVSKAVGEVEALAVNSEQIG 543
            DVA SA+ AA AAR ADQ+ REG+++I+++T  I +LA  +S  + E+E LA NSE+IG
Sbjct: 486 QDVARSAAQAAQAARDADQATREGLAVIDRTTSSIGALAANMSDTMAEIEGLAQNSEKIG 545

Query: 544 SVLEVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRNLAKRTQDSVEEIRLVIE 603
           SVLEVIRSIAEQTNLLALNAAIEAARAGE+GRGFAVVADEVRNLA+RTQ+SVEE R VIE
Sbjct: 546 SVLEVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQESVEETRQVIE 605

Query: 604 RIQSGTRGVVATMHSSQSQAQSNAGQIHQAAQALGKISDAVTVISDMNLQIASAAEQQSA 663
            +Q+GTR VV  M  S  QAQ    Q+ QA  AL +I  AVTVI+DMNLQIASAAE+QSA
Sbjct: 606 ALQNGTREVVGAMDHSHRQAQGGVEQVGQAVTALQRIGQAVTVITDMNLQIASAAEEQSA 665

Query: 664 VAEEVNRNVSAIRTVTETLTGQATESAAISSQLNALASQQMKLMDQFRV 712
           VAEE+N NV+ IR VTE+L+GQA ESA +S  LN+LA+QQ  LMDQFRV
Sbjct: 666 VAEEINSNVATIRDVTESLSGQANESARVSQSLNSLANQQQALMDQFRV 714