Pairwise Alignments

Query, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 688 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  650 bits (1676), Expect = 0.0
 Identities = 363/709 (51%), Positives = 478/709 (67%), Gaps = 27/709 (3%)

Query: 5   LSIRLKIVLLSGLCLLGVIALIISINLYETNQNDQLISDSSSRMLTSSVQSLLQSKAGEQ 64
           LSI+ KI LL+GLCLL ++AL+++ +L + +++  L++ +++ ML  S +  LQ+ A  Q
Sbjct: 6   LSIQWKITLLAGLCLLAIVALLVATSLTQAHRSAALVNQANTAMLEDSARQRLQAHAETQ 65

Query: 65  AVLLQKTFGENLLVVTALADQVKDLRALAAKRALEPGALREELNQSLKTTFERNSKVLGI 124
           A+ +Q+ F +        A  V+ L+            LR EL +  + +   N  V+G+
Sbjct: 66  ALRIQRYFMDAYQYGNGFARLVQVLKDRGGSD------LRAELTRQARASLAGNPDVIGL 119

Query: 125 WLSFEPNGLDGKDSEFVDDKARVSNEKGRFSSYWSRAGGEGLNT-IMVEDDLTKTTPNLS 183
           +L F+PN LD +DS ++   A  SNE GRFS YWS+     L    M E  L  T+   +
Sbjct: 120 YLVFQPNALDQQDSHYLGQDAMGSNESGRFSLYWSQPSPGTLELEAMPETMLGDTSIGSN 179

Query: 184 GTPYNIWYTCPRDTRKVCLLDPYADEVAGKQMLMTTISLPLMVDGNVIGVVGIDIALNTL 243
           G   N W TCP+DT + C+L+PY DEV G+Q+LMT+I+LPL+  G V+GVVG+DI L  L
Sbjct: 180 GAAKNRWLTCPQDTARTCMLEPYLDEVNGRQVLMTSIALPLLEHGKVVGVVGLDIGLANL 239

Query: 244 QAVTDAAQKELFNGAAHLDILSSTGLIAASSGQPEIVGKTLMDTVGAEGKEIVQLLASDS 303
           Q ++   +++LF+G   + I ++ GL+A +S    ++GK +  +V               
Sbjct: 240 QQLSVNGRRDLFDGQGQVSIATAAGLLAGNSRDDSVLGKPMDKSVA-------------- 285

Query: 304 PMIREQDHTIRAVYPVKPIADAKSWGVVVTLPRNVMLADTLKLQDVLDKAQAAGTLKALL 363
                 D  +R  +P  PI D   W VV+ LP +V+ A  + L   LD       L +LL
Sbjct: 286 ------DGLLRVAHPFTPIPDTAPWQVVLELPESVLQAPAVALNQRLDAHNQNANLTSLL 339

Query: 364 VGAAAALLGLLLIWLTATGVTRPINNVAAMLKDIASGDGDLTQRLAYAKKDELGELANWF 423
           +G   A+ GLLL+WLTA GVTRPI  VAA L+DIASG+GDLT+RL YA +DELG+L  WF
Sbjct: 340 IGLGTAIAGLLLVWLTARGVTRPILAVAARLEDIASGEGDLTRRLDYAHQDELGQLTGWF 399

Query: 424 NRFLDKLQPTIAQIKQSITEARGTADQSSAIARQTSEGMQVQFREIDQVATASNEMSATA 483
           NRFLDKLQP IAQ+K S+ EAR TADQS+AIA QTS+GMQ Q REI+QVATA+NEMSATA
Sbjct: 400 NRFLDKLQPVIAQVKGSLQEARNTADQSAAIASQTSDGMQQQHREIEQVATAANEMSATA 459

Query: 484 HDVANSASNAASAARGADQSAREGMSIIEQSTRDITSLAEEVSKAVGEVEALAVNSEQIG 543
            DVA++AS AA AAR ADQ+++EG+ +++ + + I  LA  ++ A+ E  AL   S QIG
Sbjct: 460 LDVAHNASQAAQAARAADQASQEGLQLVDSTRQGIDRLAAGMNTAMDEARALEDRSGQIG 519

Query: 544 SVLEVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRNLAKRTQDSVEEIRLVIE 603
           SVLEVIR+IAEQTNLLALNAAIEAARAGE+GRGFAVVADEVR LA+RTQ SVEEIR VIE
Sbjct: 520 SVLEVIRTIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQVSVEEIRQVIE 579

Query: 604 RIQSGTRGVVATMHSSQSQAQSNAGQIHQAAQALGKISDAVTVISDMNLQIASAAEQQSA 663
            +Q GT+ VV  MH+ Q QAQ +A ++ QA  AL +I +AV VISDMNLQIASAAE+QSA
Sbjct: 580 GLQQGTQDVVGAMHAGQRQAQDSAARMEQALPALQRIGEAVAVISDMNLQIASAAEEQSA 639

Query: 664 VAEEVNRNVSAIRTVTETLTGQATESAAISSQLNALASQQMKLMDQFRV 712
           VAEEVNRNV+ IR VTE+L GQA ESA IS  LN LA+QQ  LM+QFRV
Sbjct: 640 VAEEVNRNVAGIRDVTESLAGQADESARISQALNRLANQQQALMEQFRV 688