Pairwise Alignments

Query, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 539 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

 Score =  241 bits (616), Expect = 5e-68
 Identities = 145/376 (38%), Positives = 208/376 (55%), Gaps = 5/376 (1%)

Query: 341 ADTLKLQDVLDKAQAAGTLKALLVGAAAALLGLLLIWLTAT----GVTRPINNVAAMLKD 396
           A     ++      +A T   +  G   A++  +L++ TA     G+ + I++V   LKD
Sbjct: 165 AQQAAFEEAFKNTDSANT-SLISTGVILAVVVTILLFGTAVPIVRGIKQSIDDVVRSLKD 223

Query: 397 IASGDGDLTQRLAYAKKDELGELANWFNRFLDKLQPTIAQIKQSITEARGTADQSSAIAR 456
           IA  +GDLT R+    +DE+GEL  WFN+F+DKLQ  +  + ++       A     +  
Sbjct: 224 IAQENGDLTVRIETKSEDEIGELVYWFNQFMDKLQGVVRDVVEASLPLSNLAQNLRGVTE 283

Query: 457 QTSEGMQVQFREIDQVATASNEMSATAHDVANSASNAASAARGADQSAREGMSIIEQSTR 516
           +T   + VQ +       A + MS +   VA+SA+ AAS A  A  +AREG  I++Q+  
Sbjct: 284 ETQRTIDVQQKSATNAKRAVDTMSGSVDGVAHSAAQAASDANEATTAAREGRQIVQQTVT 343

Query: 517 DITSLAEEVSKAVGEVEALAVNSEQIGSVLEVIRSIAEQTNLLALNAAIEAARAGESGRG 576
            I  LAE V +    +  L  +S ++GSVL+VI+ IAEQTNLLALNAAIEAARAGE GRG
Sbjct: 344 SIQQLAENVRETADVIARLESDSNKVGSVLDVIKGIAEQTNLLALNAAIEAARAGEQGRG 403

Query: 577 FAVVADEVRNLAKRTQDSVEEIRLVIERIQSGTRGVVATMHSSQSQAQSNAGQIHQAAQA 636
           FAVVADEVR LA RTQ S EEI+  IE++Q+     V  M     QA S+    ++A  +
Sbjct: 404 FAVVADEVRTLASRTQQSTEEIQSTIEQLQNAAHSAVEVMSRGTEQATSSVETANKAGSS 463

Query: 637 LGKISDAVTVISDMNLQIASAAEQQSAVAEEVNRNVSAIRTVTETLTGQATESAAISSQL 696
           L  I+  +  I+ MN QIA   E Q  VA ++ R+V  I   TE    ++ E  ++ ++L
Sbjct: 464 LETITSTIGRINQMNEQIAHNTEDQRTVAVDIVRHVDEIHERTEQTASRSGELGSMCNEL 523

Query: 697 NALASQQMKLMDQFRV 712
             LA     +  QFRV
Sbjct: 524 ADLAQHLESIAKQFRV 539