Pairwise Alignments

Query, 854 a.a., TonB-dependent receptor from Pseudomonas simiae WCS417

Subject, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417

 Score =  111 bits (278), Expect = 2e-28
 Identities = 150/668 (22%), Positives = 238/668 (35%), Gaps = 92/668 (13%)

Query: 17  LTAAILLAAAPVMTATAAEPAARSHGNYSFSIEQQPLVSALNAFTAVTGWQVGLPAELGQ 76
           L+ A+  AA P++T  +      S     FSI    L  ALN+     G  +   A L +
Sbjct: 13  LSVAMAFAAVPLLTVQSTHAEESSSAVGRFSIPAGDLSQALNSLAEQAGLVLAFDASLTR 72

Query: 77  GVSSPGVRGPLSPEKALDRLLVGTNLSYRKLGNNNIVLEKRAP-GGALNLQQVTI----- 130
           G  S G+ G    + AL +LL G+ L   KL  +   LE     GGA+ LQ  TI     
Sbjct: 73  GKRSQGLSGQYDTDVALTQLLSGSGLQALKLSADRYRLESIPDNGGAMELQATTISGAYQ 132

Query: 131 -----------------SATRNEQNINSVPSTVTVQEREALDRQNVNTIRELVRYEPNVS 173
                            S T+ +  +   P ++++  ++ +  QN  ++ +++RY   V 
Sbjct: 133 AESPTGPVSGYVATRSLSGTKTDTALIETPQSISIVTKDQMRAQNAESLNQILRYSAAVI 192

Query: 174 VGGAGGRSSN-SGYNIRGIDGDRILTQVDGVEVPDNFFNGPYAKTRRNYVDPEIVKRVEI 232
               G  +S      IRG       T +DG+ +P        ++      D   ++RVE+
Sbjct: 193 PETRGATASRLDQLTIRGFSP---ATYLDGLRMPS-------SRDALPQKDAFDLERVEV 242

Query: 233 LRGPASALYGSSAIGGAVSYFTLDPDDIIKPGQDVGARLKTGYSS---------ADESWL 283
           LRGPAS LYG     G ++  +  P D   P  +VG    T              D+  +
Sbjct: 243 LRGPASVLYGQGTPSGVINMVSKRPLD--TPFHEVGVEYGTFNKKRTTFDLSGPMDDQGV 300

Query: 284 TSGTVAGRVQDVDGLLHLSQRNGHEMES---YDGNNATGLARTGANPEDARTTNVLAKLG 340
            S  VAG   D DG +  ++     + S   +  ++AT L   G   +D +        G
Sbjct: 301 YSYRVAGLFDDADGQVEHTETRRQSLSSAFTWRPDDATSLTLLGHFQKDPK--------G 352

Query: 341 WNYGDDNRLGLTYEKYKDDRDVNLKNAVGGPFTGGRGFNFYRARSGNDTITRERFAIENR 400
            +YG     G               + +  P       +FY      +   RE ++I   
Sbjct: 353 ASYGSVPAWG---------------SVLHSPTGRSIDVDFYDGEKNFEKSDREYYSI--G 395

Query: 401 FALDSPIADQIKTSLNYQIAKTDQSTAEIY----QPSRRVLRTRETLYEE---KQWVFDA 453
           +A +    D      N +  +++     +Y        R +R R T+  +     +  D 
Sbjct: 396 WAFEHHFDDVWTVRQNARYLRSEGQYRSLYSNYLMADYRTIR-RSTIASDVDLDAYTLDN 454

Query: 454 QLDKAFSWGDTDHQVTYGTTLKQQKVTGSREGAATCLAVGGGCTAIGAPSPTASDSVKKA 513
           Q+   F  G   H +  G    Q   T +  G+    A  G    I  P   A+  V   
Sbjct: 455 QVQAKFDTGPLQHTLLMGLDY-QNTSTDTLSGSGVYTA--GPTLDIFNPVYGAAVPVPAY 511

Query: 514 SDFPDPTINTYSLFAQDQITWDKWTFLPAVRYDYTQLKPKLTEEFLNTVDPTRIYAHSDK 573
           +           ++ Q+Q+ WDKW  L   RYD+            N+       A S  
Sbjct: 512 TTDGTSRSEQTGVYLQEQMKWDKWVLLLGGRYDWASTD--------NSTQTLSSGAKSKS 563

Query: 574 EKTWHRVTPKFGLTYALTDQYTWFGQYAEGFRTPSAKALYGRFENLQQGYTVEPNPNLKP 633
                  T + GL Y   +    +  YAE F   S     G      +G   E     +P
Sbjct: 564 SLDSKAFTGRIGLVYLFDNGLAPYASYAESFNPQSGTGYGGSVFKPTEGKQYEIGIKYQP 623

Query: 634 ESSKGVET 641
             S    T
Sbjct: 624 PGSNSFIT 631