Pairwise Alignments

Query, 322 a.a., glycerol-3-phosphate ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 316 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  107 bits (267), Expect = 4e-28
 Identities = 81/307 (26%), Positives = 135/307 (43%), Gaps = 7/307 (2%)

Query: 17  LQDTAMDQALDWLIALQCPQAG--QQAEFETWLASDPAHVHAFAKAQAAWGGAPV----H 70
           + + A D+A  W + LQ  +    ++  F+ W    P H + F   Q  W    +     
Sbjct: 1   MDNRARDEAAQWFVRLQDAELSIAERQRFDAWRNEHPDHQYEFDVLQGLWSATGLLPKAR 60

Query: 71  SAAVALAAPRKPSAWRRLKPHWKPLATAAVLLIGLFSFSNLPVRLQADHLTVVGERQRLQ 130
             A+  A   +P     L+        A  L +GLFS  + P    A+  T VGE +++ 
Sbjct: 61  LQALCEAPVERPKRRAVLRYAVAAGVIAVALGLGLFSGLDHPKPYSAEFSTGVGEHRQVA 120

Query: 131 LDDGSKVLLNTNSAFSSNIKDHQRIARLYQGEAFFDIVPSHGLPLEIDAGPVRASVRDTA 190
           L DGS + LN+ +  +   +  +R   L QGEA F +      P  + AG  + +V  T 
Sbjct: 121 LPDGSVMDLNSRTVVAVQYEKGRRGVELKQGEAMFSVEHDTSRPFVVAAGAGQVTVTGTR 180

Query: 191 FAVRYLNGEAQVQVQRGDVDLSNTFDDARVRLSAGESIRIGPKGFGQPAKLDANKDL-AW 249
           F VR   G+ +V V+ G V +     D  V L+AG    +  KG    A     ++L AW
Sbjct: 181 FDVRRDEGQTRVMVEAGTVKVQGDSPDNLVTLTAGLGTHVDNKGSVAAAYTVNTEELTAW 240

Query: 250 VQGRLIFENCPMSEVLAELRRYYPGWIVNTNDQLASVAVTGNYRLDQPLDVVRSLAHITS 309
             G+L+F N  + EV  E+ RY    +  +   + ++ +T  ++ +    ++++L HI  
Sbjct: 241 RTGKLVFNNALLGEVAREVSRYRERPLRVSTPAVGNLRLTSVFKANDTDALLKALPHILP 300

Query: 310 AKLSEYP 316
             L   P
Sbjct: 301 VALRTLP 307