Pairwise Alignments

Query, 322 a.a., glycerol-3-phosphate ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 313 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  106 bits (265), Expect = 6e-28
 Identities = 87/288 (30%), Positives = 137/288 (47%), Gaps = 29/288 (10%)

Query: 23  DQALDWLIALQ--CPQAGQQAEFETWLASDPAHVHAFAKAQAA---WGGAPVHSAAVALA 77
           +QA+ WL+ +Q       QQA ++ WL +   H  A+   Q       G P   A  AL 
Sbjct: 9   EQAVHWLVEMQHGALNPRQQAAWQQWLNAHSEHQRAWDHMQRVNQRLRGMPSPLAHAALN 68

Query: 78  APRKPSAWRRLKPHWKPLATAAVLLIGLFSFSNLPVRLQ-------ADHLTVVGERQRLQ 130
           AP   S  + LK          +L++G  S +   +R Q       AD+ + VG+R+++Q
Sbjct: 69  APTSTSRRQALK---------LLLILGAGSAAAWSLRQQHILPPLTADYRSPVGQRRKVQ 119

Query: 131 LDDGSKVLLNTNSAFSSNIKDHQRIARLYQGEAFFDIVPSH--GLPLEIDAGPVRASVRD 188
           L DGS++ LNT SA   +    QR+ RL +GE    ++  H  G PL++  G    + + 
Sbjct: 120 LADGSQLQLNTGSAVDVHFDGRQRLIRLLEGEI---LLTGHAAGTPLQVLTGQGLLTSQA 176

Query: 189 TAFAVRYLNGEAQVQVQRGDVD-LSNTFDDARVRLSAGESIRIGPKGFGQPAKLDANKDL 247
               VR  N   Q+ V  G V+ +  T+    + + A   +    KG+  P   DAN   
Sbjct: 177 ARMNVRQFNDHTQLAVLDGRVEVMPTTYSGLPLAVDATRQVNFTRKGWDTPRPTDANSG- 235

Query: 248 AWVQGRLIFENCPMSEVLAELRRYYPGWIVNTNDQLASVAVTGNYRLD 295
           AW  G L+  +  + + L EL RY  G  VN + Q+A++ ++G+Y LD
Sbjct: 236 AWADGMLVAAHMRLEDFLGELGRYRRGQ-VNCDPQVANLLISGSYPLD 282